About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Rr628364
regulatory region 628364
MGI:8090496

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 102

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231802816
MGI SNP Detail
Alliance Variant
Chr6:34684791 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1789 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs247884677
MGI SNP Detail
Alliance Variant
Chr6:34684884 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1696 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221192850
MGI SNP Detail
Alliance Variant
Chr6:34684909 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1671 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249915981
MGI SNP Detail
Alliance Variant
Chr6:34684958 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1622 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264548989
MGI SNP Detail
Alliance Variant
Chr6:34684997 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1583 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs40183008
MGI SNP Detail
Alliance Variant
Chr6:34685021 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1559 bp proximal
SNP A/G A A A A A A A A A A A A A A G
rs38469130
MGI SNP Detail
Alliance Variant
Chr6:34685104 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1476 bp proximal
SNP C/T C C C C C C T C C C C C C C C
rs36797079
MGI SNP Detail
Alliance Variant
Chr6:34685220 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1360 bp proximal
SNP C/T T T T T T T T T T T C T T T T
rs37409068
MGI SNP Detail
Alliance Variant
Chr6:34685233 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1347 bp proximal
SNP C/T C C C C C C T C C C T C C T C
rs226957071
MGI SNP Detail
Alliance Variant
Chr6:34685275 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1305 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30714517
MGI SNP Detail
Alliance Variant
Chr6:34685280 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1300 bp proximal
SNP A/C A A C C C C A C C C A A C C C A C A C
rs256890950
MGI SNP Detail
Alliance Variant
Chr6:34685344 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1236 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233256270
MGI SNP Detail
Alliance Variant
Chr6:34685385 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1195 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260403919
MGI SNP Detail
Alliance Variant
Chr6:34685401 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1179 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215949177
MGI SNP Detail
Alliance Variant
Chr6:34685413 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 1167 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239785571
MGI SNP Detail
Alliance Variant
Chr6:34685630 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 950 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245869637
MGI SNP Detail
Alliance Variant
Chr6:34685635 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 945 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs38213450
MGI SNP Detail
Alliance Variant
Chr6:34685677 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 903 bp proximal
SNP A/G G G G G G G G G G G A G G A G
rs232148813
MGI SNP Detail
Alliance Variant
Chr6:34685754 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 826 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30942198
MGI SNP Detail
Alliance Variant
Chr6:34685772 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 808 bp proximal
SNP C/G G G C C C C G C C C G G C C C G C G C
rs220709763
MGI SNP Detail
Alliance Variant
Chr6:34685839 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628364 741 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs239249308
MGI SNP Detail
Alliance Variant
Chr6:34686119 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 461 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs264071187
MGI SNP Detail
Alliance Variant
Chr6:34686135 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 445 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs223989352
MGI SNP Detail
Alliance Variant
Chr6:34686144 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 436 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs241464235
MGI SNP Detail
Alliance Variant
Chr6:34686220 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 360 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36391840
MGI SNP Detail
Alliance Variant
Chr6:34686282 Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 298 bp proximal
SNP G/T G G G G G G T G G G T G G T G
rs37224467
MGI SNP Detail
Alliance Variant
Chr6:34686500 Cald1 Coding-NonSynonymous
Cald1 Intron
Cald1 mRNA-UTR
Cald1 Noncoding-Transcript-Variant
Rr628363 within coordinates of
Rr628364 80 bp proximal
SNP A/T T T T T T T A T T T T T T T T
rs237663149
MGI SNP Detail
Alliance Variant
Chr6:34687061 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261972646
MGI SNP Detail
Alliance Variant
Chr6:34687134 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs3678572
MGI SNP Detail
Alliance Variant
Chr6:34687145 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/C A A C C C C A C A C A A C A C A A A C
rs37081606
MGI SNP Detail
Alliance Variant
Chr6:34687157 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C/T C C C C C C T C C C T C C T C
rs265538330
MGI SNP Detail
Alliance Variant
Chr6:34687165 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232560789
MGI SNP Detail
Alliance Variant
Chr6:34687210 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs50538579
MGI SNP Detail
Alliance Variant
Chr6:34687249 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C C C
rs245860538
MGI SNP Detail
Alliance Variant
Chr6:34687325 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213568361
MGI SNP Detail
Alliance Variant
Chr6:34687327 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226036461
MGI SNP Detail
Alliance Variant
Chr6:34687360 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242320190
MGI SNP Detail
Alliance Variant
Chr6:34687373 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs212820979
MGI SNP Detail
Alliance Variant
Chr6:34687403 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36308910
MGI SNP Detail
Alliance Variant
Chr6:34687450 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G A A A A A A G A A A G A A G A
rs260641038
MGI SNP Detail
Alliance Variant
Chr6:34687565 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs37452481
MGI SNP Detail
Alliance Variant
Chr6:34687566 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G A A A A A A A A A A G A A A
rs37217961
MGI SNP Detail
Alliance Variant
Chr6:34687569 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 within coordinates of
SNP A/G G G G G G G A G G G G G G G G
rs251446769
MGI SNP Detail
Alliance Variant
Chr6:34687657 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 84 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220573801
MGI SNP Detail
Alliance Variant
Chr6:34687773 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 200 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs237548825
MGI SNP Detail
Alliance Variant
Chr6:34687824 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 251 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261752677
MGI SNP Detail
Alliance Variant
Chr6:34687843 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 270 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs226194929
MGI SNP Detail
Alliance Variant
Chr6:34687886 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 313 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36782745
MGI SNP Detail
Alliance Variant
Chr6:34687898 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 325 bp distal
SNP A/G A A A A A A G A A A A A A A A
rs52453407
MGI SNP Detail
Alliance Variant
Chr6:34687978 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 405 bp distal
SNP C/T T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586639010
MGI SNP Detail
Alliance Variant
Chr6:34688022 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 449 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37480678
MGI SNP Detail
Alliance Variant
Chr6:34688074 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 501 bp distal
SNP C/T C T T T T C T T C C T C T C C C T
rs237787718
MGI SNP Detail
Alliance Variant
Chr6:34688096 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 523 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255224716
MGI SNP Detail
Alliance Variant
Chr6:34688120 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 547 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225922963
MGI SNP Detail
Alliance Variant
Chr6:34688121 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 548 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249060277
MGI SNP Detail
Alliance Variant
Chr6:34688230 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 657 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213169984
MGI SNP Detail
Alliance Variant
Chr6:34688231 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 658 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233130227
MGI SNP Detail
Alliance Variant
Chr6:34688233 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 660 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259773209
MGI SNP Detail
Alliance Variant
Chr6:34688242 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 669 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580943738
MGI SNP Detail
Alliance Variant
Chr6:34688258 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 685 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215330004
MGI SNP Detail
Alliance Variant
Chr6:34688333 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 760 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234534038
MGI SNP Detail
Alliance Variant
Chr6:34688372 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 799 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250978081
MGI SNP Detail
Alliance Variant
Chr6:34688377 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 804 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30812683
MGI SNP Detail
Alliance Variant
Chr6:34688380 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 807 bp distal
SNP A/C C A A A A C
rs230086182
MGI SNP Detail
Alliance Variant
Chr6:34688412 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 839 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38826837
MGI SNP Detail
Alliance Variant
Chr6:34688456 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 883 bp distal
SNP C/T C C C C C C T C C C C C C C C
rs226634417
MGI SNP Detail
Alliance Variant
Chr6:34688538 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 965 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240757634
MGI SNP Detail
Alliance Variant
Chr6:34688559 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 986 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30714142
MGI SNP Detail
Alliance Variant
Chr6:34688579 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1006 bp distal
SNP A/G G A A A A G
rs221509185
MGI SNP Detail
Alliance Variant
Chr6:34688605 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1032 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237672591
MGI SNP Detail
Alliance Variant
Chr6:34688648 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1075 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256479589
MGI SNP Detail
Alliance Variant
Chr6:34688658 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1085 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs30063591
MGI SNP Detail
Alliance Variant
Chr6:34688662 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1089 bp distal
SNP C/T T T C C C C T C C C T T C T C T T C
rs37580850
MGI SNP Detail
Alliance Variant
Chr6:34688689 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1116 bp distal
SNP A/C A A A A A A A A A A A A A C A
rs261904478
MGI SNP Detail
Alliance Variant
Chr6:34688720 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1147 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234019946
MGI SNP Detail
Alliance Variant
Chr6:34688775 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1202 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36760592
MGI SNP Detail
Alliance Variant
Chr6:34688843 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1270 bp distal
SNP A/T T T T T T T A T T T T T T T T
rs259079741
MGI SNP Detail
Alliance Variant
Chr6:34688849 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1276 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227794298
MGI SNP Detail
Alliance Variant
Chr6:34688860 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1287 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs244705004
MGI SNP Detail
Alliance Variant
Chr6:34688865 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1292 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214146934
MGI SNP Detail
Alliance Variant
Chr6:34688874 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1301 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234491156
MGI SNP Detail
Alliance Variant
Chr6:34688898 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1325 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37596943
MGI SNP Detail
Alliance Variant
Chr6:34688946 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1373 bp distal
SNP C/T C C C C C C C C C C C C C C T
rs218476961
MGI SNP Detail
Alliance Variant
Chr6:34688956 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1383 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30614075
MGI SNP Detail
Alliance Variant
Chr6:34689017 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1444 bp distal
SNP C/T C C T T T T C T C T C C T C T C C C T
rs258977192
MGI SNP Detail
Alliance Variant
Chr6:34689025 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1452 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221700704
MGI SNP Detail
Alliance Variant
Chr6:34689061 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1488 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231443098
MGI SNP Detail
Alliance Variant
Chr6:34689062 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1489 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36683766
MGI SNP Detail
Alliance Variant
Chr6:34689101 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1528 bp distal
SNP A/G G G G G G G A G G G A G G A G
rs218108331
MGI SNP Detail
Alliance Variant
Chr6:34689113 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1540 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30987315
MGI SNP Detail
Alliance Variant
Chr6:34689155 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1582 bp distal
SNP C/T C C C T
rs242421874
MGI SNP Detail
Alliance Variant
Chr6:34689162 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Rr628364 1589 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264824819
MGI SNP Detail
Alliance Variant
Chr6:34689241 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1668 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36316763
MGI SNP Detail
Alliance Variant
Chr6:34689297 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1724 bp distal
SNP C/T C C C C C C C C C C T C C T C
rs251130792
MGI SNP Detail
Alliance Variant
Chr6:34689298 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1725 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259018597
MGI SNP Detail
Alliance Variant
Chr6:34689372 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1799 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs584236377
MGI SNP Detail
Alliance Variant
Chr6:34689407 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1834 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs578460941
MGI SNP Detail
Alliance Variant
Chr6:34689416 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1843 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs580650304
MGI SNP Detail
Alliance Variant
Chr6:34689431 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1858 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228087683
MGI SNP Detail
Alliance Variant
Chr6:34689467 Cald1 Intron
Cald1 Noncoding-Transcript-Variant
Gm38787 within coordinates of
Rr628364 1894 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 102

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

Building initial tooltip...