Mouse SNP Summary
|
Symbol Name ID |
Rr630377
regulatory region 630377 MGI:8092509 |
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SNPs to Text File
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs227674620 MGI SNP Detail Alliance Variant |
Chr6:52201165 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs247493602 MGI SNP Detail Alliance Variant |
Chr6:52201168 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs217053977 MGI SNP Detail Alliance Variant |
Chr6:52201468 | Cpgi17430 Gm57855 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs229554551 MGI SNP Detail Alliance Variant |
Chr6:52201493 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs252760566 MGI SNP Detail Alliance Variant |
Chr6:52201503 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||
| rs212859911 MGI SNP Detail Alliance Variant |
Chr6:52201507 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | ||
| rs238331445 MGI SNP Detail Alliance Variant |
Chr6:52201578 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 Tssr61006 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs258065020 MGI SNP Detail Alliance Variant |
Chr6:52201605 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs215337147 MGI SNP Detail Alliance Variant |
Chr6:52201621 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs232784964 MGI SNP Detail Alliance Variant |
Chr6:52201655 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs251836809 MGI SNP Detail Alliance Variant |
Chr6:52201771 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | ||
| rs585393850 MGI SNP Detail Alliance Variant |
Chr6:52201831 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs587505998 MGI SNP Detail Alliance Variant |
Chr6:52201931 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs248255790 MGI SNP Detail Alliance Variant |
Chr6:52201942 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs580866098 MGI SNP Detail Alliance Variant |
Chr6:52201953 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs49637788 MGI SNP Detail Alliance Variant |
Chr6:52201997 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | G | A | ||||||||||||||||||||||||||||||||||||||||||||
| rs221013413 MGI SNP Detail Alliance Variant |
Chr6:52202025 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs245570872 MGI SNP Detail Alliance Variant |
Chr6:52202085 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | ||
| rs50768324 MGI SNP Detail Alliance Variant |
Chr6:52202099 | Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | G/T | T | G | T | G | T | T | T | G | G | G | G | ||||||||||||||||||||||||||||||||||||||||||||
| rs227131779 MGI SNP Detail Alliance Variant |
Chr6:52202119 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs241553340 MGI SNP Detail Alliance Variant |
Chr6:52202155 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs48024775 MGI SNP Detail Alliance Variant |
Chr6:52202388 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | G | A | |||||||||||||||||||||||||||||||||||||||||||
| rs235739509 MGI SNP Detail Alliance Variant |
Chr6:52202569 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs46910944 MGI SNP Detail Alliance Variant |
Chr6:52202842 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Hoxa9 Rr630377 Tssr61009 |
SNP | C/T | C | T | C | T | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs213684618 MGI SNP Detail Alliance Variant |
Chr6:52202929 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Hoxa9 Rr630377 Tssr61010 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | ||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs51160505 MGI SNP Detail Alliance Variant |
Chr6:52203019 | Cpgi17431 Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | G | A | G | A | A | G | G | G | G | G | ||||||||||||||||||||||||||||||||||||||||||||
| rs256364329 MGI SNP Detail Alliance Variant |
Chr6:52203450 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 |
SNP | A/T | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A | ||
| rs47663907 MGI SNP Detail Alliance Variant |
Chr6:52203730 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | C/T | T | T | T | T | T | T | T | T | C | T | T | C | T | ||||||||||||||||||||||||||||||||||||||||||
| rs233689715 MGI SNP Detail Alliance Variant |
Chr6:52203864 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs251847237 MGI SNP Detail Alliance Variant |
Chr6:52203869 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | A/C/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | C | A | A | A | A | C | A | A | A | A | A | C | A | A | A | A | A | A | C | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs48094681 MGI SNP Detail Alliance Variant |
Chr6:52203936 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | A/G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | |||||||||||||||||||||||||||||||||||||||||
| rs216528570 MGI SNP Detail Alliance Variant |
Chr6:52204140 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | A/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | T | A | T | T | T | T | ||
| rs243036544 MGI SNP Detail Alliance Variant |
Chr6:52204151 | Gm57855 Gm57855 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630378 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs255502788 MGI SNP Detail Alliance Variant |
Chr6:52204220 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630379 |
SNP | G/T | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | T | G | G | G | G | ||
| rs221017135 MGI SNP Detail Alliance Variant |
Chr6:52204246 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630379 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs242799931 MGI SNP Detail Alliance Variant |
Chr6:52204339 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Hoxa9 Rr630377 Rr630379 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | C | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs584391193 MGI SNP Detail Alliance Variant |
Chr6:52204377 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs30312708 MGI SNP Detail Alliance Variant |
Chr6:52204381 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/T | T | C | C | C | |||||||||||||||||||||||||||||||||||||||||||||||||||
| rs578330745 MGI SNP Detail Alliance Variant |
Chr6:52204390 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||
| rs220826829 MGI SNP Detail Alliance Variant |
Chr6:52204422 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | ||||
| rs29872040 MGI SNP Detail Alliance Variant |
Chr6:52204436 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/T | C | T | T | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| rs260872942 MGI SNP Detail Alliance Variant |
Chr6:52204450 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | C/G | G | G | G | C | G | G | G | G | G | G | C | G | C | C | G | G | G | C | C | C | G | C | C | G | G | C | G | ||||||||||||||||||||||||||||
| rs226999877 MGI SNP Detail Alliance Variant |
Chr6:52204465 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | G | G | G | G | A | G | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | G | G | ||||
| rs244336316 MGI SNP Detail Alliance Variant |
Chr6:52204563 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | ||
| rs262177271 MGI SNP Detail Alliance Variant |
Chr6:52204696 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | C | ||
| rs230659883 MGI SNP Detail Alliance Variant |
Chr6:52204735 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs244634823 MGI SNP Detail Alliance Variant |
Chr6:52204805 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | ||
| rs49300437 MGI SNP Detail Alliance Variant |
Chr6:52204811 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 Rr630380 |
SNP | A/G | A | A | A | A | A | A | A | A | A | G | A | A | G | A | |||||||||||||||||||||||||||||||||||||||||
| rs227751707 MGI SNP Detail Alliance Variant |
Chr6:52204915 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||
| rs246824675 MGI SNP Detail Alliance Variant |
Chr6:52205042 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 |
SNP | G/T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | T | T | T | |||
| SNP ID (GRCm39) |
Map Position (GRCm39) |
Gene & Category | Variation Type |
Allele Summary (all strains) |
129P2/OlaHsd
|
129S1/SvImJ
|
129S5/SvEvBrd
|
129X1/SvJ
|
A/J
|
AKR/J
|
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
|
BALB/cByJ
|
BALB/cJ
|
BTBR T<+> Itpr3<tf>/J
|
BUB/BnJ
|
C3H/HeH
|
C3H/HeJ
|
C57BL/10J
|
C57BL/10SnJ
|
C57BL/6J
|
C57BL/6NJ
|
C57BR/cdJ
|
C57L/J
|
C58/J
|
CAST/EiJ
|
CBA/J
|
CE/J
|
CZECHII/EiJ
|
DBA/1J
|
DBA/2J
|
FVB/NJ
|
I/LnJ
|
JF1/MsJ
|
KK/HlJ
|
LEWES/EiJ
|
LG/J
|
LP/J
|
MA/MyJ
|
MOLF/EiJ
|
NOD/ShiLtJ
|
NON/ShiLtJ
|
NZB/BlNJ
|
NZO/HlLtJ
|
NZW/LacJ
|
PL/J
|
PWD/PhJ
|
PWK/PhJ
|
QSi3/Ianm
|
QSi5/Ianm
|
RF/J
|
RIIIS/J
|
SEA/GnJ
|
SJL/J
|
SM/J
|
SPRET/EiJ
|
ST/bJ
|
SWR/J
|
WSB/EiJ
|
ZALENDE/EiJ
|
| rs219291469 MGI SNP Detail Alliance Variant |
Chr6:52205083 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs240216715 MGI SNP Detail Alliance Variant |
Chr6:52205094 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 |
SNP | C/G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | G | G | G | ||
| rs252375315 MGI SNP Detail Alliance Variant |
Chr6:52205151 | Gm57855 Gm57855 Gm68361 Hoxa9 Hoxa9 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C | C | C | ||
| rs212849786 MGI SNP Detail Alliance Variant |
Chr6:52205215 | Gm57855 Gm57855 Rr630377 |
SNP | A/C | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A | A | A | A | |||
| rs237979034 MGI SNP Detail Alliance Variant |
Chr6:52205312 | Gm57855 Gm57855 Rr630377 |
SNP | C/T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C | ||||
| rs251670121 MGI SNP Detail Alliance Variant |
Chr6:52205369 | Gm57855 Gm57855 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs220698007 MGI SNP Detail Alliance Variant |
Chr6:52205372 | Gm57855 Gm57855 Rr630377 |
SNP | A/G | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A | ||
| rs234570590 MGI SNP Detail Alliance Variant |
Chr6:52205543 | Gm57855 Gm57855 Rr630377 |
SNP | C/G | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C | ||
| rs47230866 MGI SNP Detail Alliance Variant |
Chr6:52205612 | Gm57855 Gm57855 Rr630377 |
SNP | A/T | A | A | A | A | A | A | A | A | T | A | A | A | A |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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