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Mouse SNP Summary
Symbol
Name
ID
Rr630474
regulatory region 630474
MGI:8092606

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215172541
MGI SNP Detail
Alliance Variant
Chr6:52710477 Rr630474 1853 bp proximal
Tax1bp1 Intron
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233722424
MGI SNP Detail
Alliance Variant
Chr6:52710800 Rr630474 1530 bp proximal
Tax1bp1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253522284
MGI SNP Detail
Alliance Variant
Chr6:52710816 Rr630474 1514 bp proximal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216441413
MGI SNP Detail
Alliance Variant
Chr6:52710843 Rr630474 1487 bp proximal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236175707
MGI SNP Detail
Alliance Variant
Chr6:52710885 Rr630474 1445 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260587631
MGI SNP Detail
Alliance Variant
Chr6:52710888 Rr630474 1442 bp proximal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221070997
MGI SNP Detail
Alliance Variant
Chr6:52710895 Rr630474 1435 bp proximal
Tax1bp1 Intron
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245638739
MGI SNP Detail
Alliance Variant
Chr6:52710935 Rr630474 1395 bp proximal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29889630
MGI SNP Detail
Alliance Variant
Chr6:52711092 Rr630474 1238 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G A G G G A G G G
rs221116857
MGI SNP Detail
Alliance Variant
Chr6:52711150 Rr630474 1180 bp proximal
Tax1bp1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240295190
MGI SNP Detail
Alliance Variant
Chr6:52711181 Rr630474 1149 bp proximal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs259344812
MGI SNP Detail
Alliance Variant
Chr6:52711229 Rr630474 1101 bp proximal
Tax1bp1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229362124
MGI SNP Detail
Alliance Variant
Chr6:52711301 Rr630474 1029 bp proximal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29889632
MGI SNP Detail
Alliance Variant
Chr6:52711335 Rr630474 995 bp proximal
Tax1bp1 Intron
SNP G/T G G G G G G T G G G T G G T G
rs264917163
MGI SNP Detail
Alliance Variant
Chr6:52711350 Rr630474 980 bp proximal
Tax1bp1 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230045149
MGI SNP Detail
Alliance Variant
Chr6:52711427 Rr630474 903 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256401680
MGI SNP Detail
Alliance Variant
Chr6:52711485 Rr630474 845 bp proximal
Tax1bp1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214714317
MGI SNP Detail
Alliance Variant
Chr6:52711486 Rr630474 844 bp proximal
Tax1bp1 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227328696
MGI SNP Detail
Alliance Variant
Chr6:52711554 Rr630474 776 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29890534
MGI SNP Detail
Alliance Variant
Chr6:52711585 Rr630474 745 bp proximal
Tax1bp1 Intron
SNP A/G A A A A A A A A A G A A A A
rs247115433
MGI SNP Detail
Alliance Variant
Chr6:52711593 Rr630474 737 bp proximal
Tax1bp1 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216571687
MGI SNP Detail
Alliance Variant
Chr6:52711608 Rr630474 722 bp proximal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29890536
MGI SNP Detail
Alliance Variant
Chr6:52711610 Rr630474 720 bp proximal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T C T T T T
rs236117629
MGI SNP Detail
Alliance Variant
Chr6:52711694 Rr630474 636 bp proximal
Tax1bp1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs255276413
MGI SNP Detail
Alliance Variant
Chr6:52711822 Rr630474 508 bp proximal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29890538
MGI SNP Detail
Alliance Variant
Chr6:52711894 Rr630474 436 bp proximal
Tax1bp1 Intron
SNP C/T T T T T T T C T T T C T T C T
rs235864953
MGI SNP Detail
Alliance Variant
Chr6:52711896 Rr630474 434 bp proximal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262287842
MGI SNP Detail
Alliance Variant
Chr6:52711992 Rr630474 338 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30463922
MGI SNP Detail
Alliance Variant
Chr6:52712044 Rr630474 286 bp proximal
Tax1bp1 Intron
SNP C/G C C G C C C
rs240434277
MGI SNP Detail
Alliance Variant
Chr6:52712045 Rr630474 285 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252789353
MGI SNP Detail
Alliance Variant
Chr6:52712201 Rr630474 129 bp proximal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222968097
MGI SNP Detail
Alliance Variant
Chr6:52712310 Rr630474 20 bp proximal
Tax1bp1 Intron
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29890540
MGI SNP Detail
Alliance Variant
Chr6:52712464 Rr630474 113 bp distal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A G A
rs244427036
MGI SNP Detail
Alliance Variant
Chr6:52712503 Rr630474 152 bp distal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs262021146
MGI SNP Detail
Alliance Variant
Chr6:52713095 Rr630474 744 bp distal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222376114
MGI SNP Detail
Alliance Variant
Chr6:52713158 Rr630474 807 bp distal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29890542
MGI SNP Detail
Alliance Variant
Chr6:52713309 Rr630474 958 bp distal
Tax1bp1 Intron
SNP A/C A A A A A C A A A C A A C A
rs259184373
MGI SNP Detail
Alliance Variant
Chr6:52713413 Rr630474 1062 bp distal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227271926
MGI SNP Detail
Alliance Variant
Chr6:52713439 Rr630474 1088 bp distal
Tax1bp1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247232626
MGI SNP Detail
Alliance Variant
Chr6:52713509 Rr630474 1158 bp distal
Tax1bp1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260649774
MGI SNP Detail
Alliance Variant
Chr6:52713510 Rr630474 1159 bp distal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233741727
MGI SNP Detail
Alliance Variant
Chr6:52713511 Rr630474 1160 bp distal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252419495
MGI SNP Detail
Alliance Variant
Chr6:52713515 Rr630474 1164 bp distal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212585241
MGI SNP Detail
Alliance Variant
Chr6:52713524 Rr630474 1173 bp distal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237797762
MGI SNP Detail
Alliance Variant
Chr6:52713529 Rr630474 1178 bp distal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251151605
MGI SNP Detail
Alliance Variant
Chr6:52713572 Rr630474 1221 bp distal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214885203
MGI SNP Detail
Alliance Variant
Chr6:52713740 Rr630474 1389 bp distal
Tax1bp1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233320774
MGI SNP Detail
Alliance Variant
Chr6:52713751 Rr630474 1400 bp distal
Tax1bp1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252880325
MGI SNP Detail
Alliance Variant
Chr6:52713830 Rr630474 1479 bp distal
Tax1bp1 Intron
Tax1bp1 Splice-Site
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223115516
MGI SNP Detail
Alliance Variant
Chr6:52713941 Rr630474 1590 bp distal
Tax1bp1 Coding-NonSynonymous
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29891304
MGI SNP Detail
Alliance Variant
Chr6:52714082 Rr630474 1731 bp distal
Tax1bp1 Coding-Synonymous
Tssr56539 within coordinates of
SNP C/G C C C C C C G C C C C C C C C
rs261721870
MGI SNP Detail
Alliance Variant
Chr6:52714125 Rr630474 1774 bp distal
Tax1bp1 Coding-NonSynonymous
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222712950
MGI SNP Detail
Alliance Variant
Chr6:52714169 Rr630474 1818 bp distal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247079506
MGI SNP Detail
Alliance Variant
Chr6:52714183 Rr630474 1832 bp distal
Tax1bp1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259122348
MGI SNP Detail
Alliance Variant
Chr6:52714239 Rr630474 1888 bp distal
Tax1bp1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221943920
MGI SNP Detail
Alliance Variant
Chr6:52714351 Rr630474 2000 bp distal
Tax1bp1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 56 of 56

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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