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Mouse SNP Summary
Symbol
Name
ID
Rr632259
regulatory region 632259
MGI:8094391

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222559074
MGI SNP Detail
Alliance Variant
Chr6:72622336 Rr632258 within coordinates of
Rr632259 1874 bp proximal
Tcf7l1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs38065000
MGI SNP Detail
Alliance Variant
Chr6:72622434 Rr632258 within coordinates of
Rr632259 1776 bp proximal
Tcf7l1 Intron
SNP C/G G G G G G G G G G G G G G G C
rs248083376
MGI SNP Detail
Alliance Variant
Chr6:72622537 Rr632258 within coordinates of
Rr632259 1673 bp proximal
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A G G A A G A A A A G G A A A A G G A A A A A G G G A A A A A G A A G A
rs580282789
MGI SNP Detail
Alliance Variant
Chr6:72622568 Rr632258 within coordinates of
Rr632259 1642 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218581046
MGI SNP Detail
Alliance Variant
Chr6:72622653 Rr632258 within coordinates of
Rr632259 1557 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240694592
MGI SNP Detail
Alliance Variant
Chr6:72622727 Rr632258 within coordinates of
Rr632259 1483 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259276026
MGI SNP Detail
Alliance Variant
Chr6:72622756 Rr632258 within coordinates of
Rr632259 1454 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G A A G G A G G G G A A G G G G A A G G G G G A A A G G G G G A G G G G
rs229376963
MGI SNP Detail
Alliance Variant
Chr6:72622768 Rr632258 within coordinates of
Rr632259 1442 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T T C C C C T T C C C C C T T T C C C C C T C C C C
rs245364338
MGI SNP Detail
Alliance Variant
Chr6:72622774 Rr632258 within coordinates of
Rr632259 1436 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T T C C C C T T C C C C C T T T C C C C C T C C C C
rs30797315
MGI SNP Detail
Alliance Variant
Chr6:72622775 Rr632258 within coordinates of
Rr632259 1435 bp proximal
Tcf7l1 Intron
SNP A/G A A A A G G G
rs36994266
MGI SNP Detail
Alliance Variant
Chr6:72622810 Rr632258 within coordinates of
Rr632259 1400 bp proximal
Tcf7l1 Intron
SNP A/G A A A A A G A G G G A G A
rs256684080
MGI SNP Detail
Alliance Variant
Chr6:72622857 Rr632258 within coordinates of
Rr632259 1353 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212426222
MGI SNP Detail
Alliance Variant
Chr6:72622864 Rr632258 within coordinates of
Rr632259 1346 bp proximal
Tcf7l1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs225259700
MGI SNP Detail
Alliance Variant
Chr6:72622875 Rr632259 1335 bp proximal
Tcf7l1 Intron
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248269034
MGI SNP Detail
Alliance Variant
Chr6:72622938 Rr632259 1272 bp proximal
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A A A A A A G G G A A A A A A A A A A
rs583372057
MGI SNP Detail
Alliance Variant
Chr6:72622998 Rr632259 1212 bp proximal
Tcf7l1 Intron
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587481593
MGI SNP Detail
Alliance Variant
Chr6:72623002 Rr632259 1208 bp proximal
Tcf7l1 Intron
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580240922
MGI SNP Detail
Alliance Variant
Chr6:72623016 Rr632259 1194 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217241660
MGI SNP Detail
Alliance Variant
Chr6:72623065 Rr632259 1145 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T C C T T C T T T T C C T T T T C C T T T T T C C C T T T T T T T T T T
rs239638778
MGI SNP Detail
Alliance Variant
Chr6:72623073 Rr632259 1137 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G A A G G A G G G G A A G G G G A A G G G G G A A A G G G G G G G G G G
rs259097719
MGI SNP Detail
Alliance Variant
Chr6:72623080 Rr632259 1130 bp proximal
Tcf7l1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583943781
MGI SNP Detail
Alliance Variant
Chr6:72623135 Rr632259 1075 bp proximal
Tcf7l1 Intron
SNP G/T G G G G G G G G G G G G G G G G G T G G G T G G G G T G G G G T T G G G G G T T T G G G G G G G G G G
rs586875569
MGI SNP Detail
Alliance Variant
Chr6:72623160 Rr632259 1050 bp proximal
Tcf7l1 Intron
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213786658
MGI SNP Detail
Alliance Variant
Chr6:72623234 Rr632259 976 bp proximal
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A G A A G A A A A G G A A A A G G A A A A A G G G A A A A A G A A A A
rs236649135
MGI SNP Detail
Alliance Variant
Chr6:72623271 Rr632259 939 bp proximal
Tcf7l1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248172191
MGI SNP Detail
Alliance Variant
Chr6:72623323 Rr632259 887 bp proximal
Tcf7l1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218636494
MGI SNP Detail
Alliance Variant
Chr6:72623340 Rr632259 870 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240755634
MGI SNP Detail
Alliance Variant
Chr6:72623371 Rr632259 839 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T C C T T C T T T T C C T T T T C T T T T T C T T T T T C T T T T
rs253053898
MGI SNP Detail
Alliance Variant
Chr6:72623427 Rr632259 783 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226927102
MGI SNP Detail
Alliance Variant
Chr6:72623430 Rr632259 780 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581333629
MGI SNP Detail
Alliance Variant
Chr6:72623604 Rr632259 606 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584479260
MGI SNP Detail
Alliance Variant
Chr6:72623655 Rr632259 555 bp proximal
Tcf7l1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C A A C C A C C C C A A C C C C A A C C C C C A C C C C C C C C C C
rs579012816
MGI SNP Detail
Alliance Variant
Chr6:72623662 Rr632259 548 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T C C T T C T T T T C C T T T T C C T T T T T C C C T T T T T C T T T T
rs247973625
MGI SNP Detail
Alliance Variant
Chr6:72623730 Rr632259 480 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C T T C C C C C T T T C C C C C T C C C C
rs263618147
MGI SNP Detail
Alliance Variant
Chr6:72623735 Rr632259 475 bp proximal
Tcf7l1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C A C C C A C C C C C A C C C C A A C C C C C A A A C C C C C C C C C C
rs222235193
MGI SNP Detail
Alliance Variant
Chr6:72623748 Rr632259 462 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244189177
MGI SNP Detail
Alliance Variant
Chr6:72623799 Rr632259 411 bp proximal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36792863
MGI SNP Detail
Alliance Variant
Chr6:72623820 Rr632259 390 bp proximal
Tcf7l1 Intron
SNP C/T C T C C T T T C T C
rs225321811
MGI SNP Detail
Alliance Variant
Chr6:72623849 Rr632259 361 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248282061
MGI SNP Detail
Alliance Variant
Chr6:72623877 Rr632259 333 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T C C T T T T C C T T T T T C C C T T T T T C T T T T
rs261446700
MGI SNP Detail
Alliance Variant
Chr6:72623906 Rr632259 304 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T C T T T T C C T T T T T C C C T T T T T C T T C T
rs231465443
MGI SNP Detail
Alliance Variant
Chr6:72623942 Rr632259 268 bp proximal
Tcf7l1 Intron
SNP C/G/T G G G G G G G G G G G G G G G G G G C T G G C G G G G G C G G G G C C G G G G G C C C G G G G G G G G G G
rs257926024
MGI SNP Detail
Alliance Variant
Chr6:72623969 Rr632259 241 bp proximal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213459827
MGI SNP Detail
Alliance Variant
Chr6:72623992 Rr632259 218 bp proximal
Tcf7l1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs238759760
MGI SNP Detail
Alliance Variant
Chr6:72623995 Rr632259 215 bp proximal
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242000119
MGI SNP Detail
Alliance Variant
Chr6:72624007 Rr632259 203 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212874710
MGI SNP Detail
Alliance Variant
Chr6:72624022 Rr632259 188 bp proximal
Tcf7l1 Intron
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs234237289
MGI SNP Detail
Alliance Variant
Chr6:72624079 Rr632259 131 bp proximal
Tcf7l1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T A A T T A T T T T T A T T T T A A T T T T T A A A T T T T T A T T T T
rs253098163
MGI SNP Detail
Alliance Variant
Chr6:72624160 Rr632259 50 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T C C T T T T C C T T T T T C C C T T T T T T T T T T
rs224006445
MGI SNP Detail
Alliance Variant
Chr6:72624198 Rr632259 12 bp proximal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T T C T T T T C C T T T T T C C C T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238543615
MGI SNP Detail
Alliance Variant
Chr6:72624219 Rr632259 within coordinates of
Tcf7l1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G T T G G T G G G G T T G G G G T T G G G G G T T T G G G G G T G G G G
rs263474067
MGI SNP Detail
Alliance Variant
Chr6:72624220 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T T C C C C T T C C C C C T T T C C C C C T C C C C
rs222737788
MGI SNP Detail
Alliance Variant
Chr6:72624249 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239828854
MGI SNP Detail
Alliance Variant
Chr6:72624256 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256060403
MGI SNP Detail
Alliance Variant
Chr6:72624263 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219199735
MGI SNP Detail
Alliance Variant
Chr6:72624277 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242333313
MGI SNP Detail
Alliance Variant
Chr6:72624342 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264566771
MGI SNP Detail
Alliance Variant
Chr6:72624343 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232485903
MGI SNP Detail
Alliance Variant
Chr6:72624446 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253422025
MGI SNP Detail
Alliance Variant
Chr6:72624520 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36579551
MGI SNP Detail
Alliance Variant
Chr6:72624551 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/G A G A G G G G A
rs38896519
MGI SNP Detail
Alliance Variant
Chr6:72624591 Rr632259 within coordinates of
Tcf7l1 Intron
SNP A/T T T A T T T T T
rs242014692
MGI SNP Detail
Alliance Variant
Chr6:72624653 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C T T C C C C T T C C C C C T T T C C C C C C C C C C
rs212535716
MGI SNP Detail
Alliance Variant
Chr6:72624759 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234302240
MGI SNP Detail
Alliance Variant
Chr6:72624774 Rr632259 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585174497
MGI SNP Detail
Alliance Variant
Chr6:72624957 Rr632259 14 bp distal
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G A A G G G G G G A A G G G G G G G G G G
rs247451278
MGI SNP Detail
Alliance Variant
Chr6:72624964 Rr632259 21 bp distal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C C T T T T C C T T T T T C C C T T T T T T T T T T
rs215675176
MGI SNP Detail
Alliance Variant
Chr6:72624982 Rr632259 39 bp distal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C T T C C C C T T C C C C C T T T C C C C C C C C C C
rs240928037
MGI SNP Detail
Alliance Variant
Chr6:72624994 Rr632259 51 bp distal
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs256949151
MGI SNP Detail
Alliance Variant
Chr6:72625027 Rr632259 84 bp distal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C T T C C C C C T T T C C C C C T C C C C
rs222339956
MGI SNP Detail
Alliance Variant
Chr6:72625062 Rr632259 119 bp distal
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C T T C C C C C T T T C C C C C T C C C C
rs233006779
MGI SNP Detail
Alliance Variant
Chr6:72625113 Rr632259 170 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578487432
MGI SNP Detail
Alliance Variant
Chr6:72625123 Rr632259 180 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249707865
MGI SNP Detail
Alliance Variant
Chr6:72625164 Rr632259 221 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs218899912
MGI SNP Detail
Alliance Variant
Chr6:72625165 Rr632259 222 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242054953
MGI SNP Detail
Alliance Variant
Chr6:72625172 Rr632259 229 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C C T T T T C C T T T T T C C C T T T T T C T T T T
rs264454463
MGI SNP Detail
Alliance Variant
Chr6:72625282 Rr632259 339 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T T C T T T T C C T T T T T C C C T T T T T C T T T T
rs224557360
MGI SNP Detail
Alliance Variant
Chr6:72625313 Rr632259 370 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249489841
MGI SNP Detail
Alliance Variant
Chr6:72625337 Rr632259 394 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs38765760
MGI SNP Detail
Alliance Variant
Chr6:72625340 Rr632259 397 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP A/G G A G G G G G G
rs36469815
MGI SNP Detail
Alliance Variant
Chr6:72625349 Rr632259 406 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G A G
rs581910871
MGI SNP Detail
Alliance Variant
Chr6:72625439 Rr632259 496 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235656802
MGI SNP Detail
Alliance Variant
Chr6:72625442 Rr632259 499 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP G/T T T T T T T T T T T T T T T T T T T G G T T G T T T T G G T T T T G G T T T T T G G G T T T T T G T T T T
rs254423318
MGI SNP Detail
Alliance Variant
Chr6:72625445 Rr632259 502 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C G G C C G C C C C G G C C C C G G C C C C C G G G C C C C C C C C C C
rs37665144
MGI SNP Detail
Alliance Variant
Chr6:72625543 Rr632259 600 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/T T T C T C C C T C T
rs228026742
MGI SNP Detail
Alliance Variant
Chr6:72625614 Rr632259 671 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs36281445
MGI SNP Detail
Alliance Variant
Chr6:72625634 Rr632259 691 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
SNP G/T G G G G T G
rs254381052
MGI SNP Detail
Alliance Variant
Chr6:72625845 Rr632259 902 bp distal
Rr632261 within coordinates of
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T C T T T T T T C C T T T T T T T T T T
rs216185723
MGI SNP Detail
Alliance Variant
Chr6:72625940 Rr632259 997 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232310203
MGI SNP Detail
Alliance Variant
Chr6:72625981 Rr632259 1038 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G A G G G A G G G G G A G G G G A A G G G G G A A A G G G G G G G G G
rs255088243
MGI SNP Detail
Alliance Variant
Chr6:72625985 Rr632259 1042 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs214585341
MGI SNP Detail
Alliance Variant
Chr6:72626006 Rr632259 1063 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C T T C C C C C T T T C C C C C C C C C
rs38836933
MGI SNP Detail
Alliance Variant
Chr6:72626007 Rr632259 1064 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP A/G A A G A A
rs233090409
MGI SNP Detail
Alliance Variant
Chr6:72626017 Rr632259 1074 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249824293
MGI SNP Detail
Alliance Variant
Chr6:72626070 Rr632259 1127 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213050003
MGI SNP Detail
Alliance Variant
Chr6:72626124 Rr632259 1181 bp distal
Tcf7l1 Coding-Synonymous
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235632908
MGI SNP Detail
Alliance Variant
Chr6:72626208 Rr632259 1265 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260913396
MGI SNP Detail
Alliance Variant
Chr6:72626229 Rr632259 1286 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224663393
MGI SNP Detail
Alliance Variant
Chr6:72626245 Rr632259 1302 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246843464
MGI SNP Detail
Alliance Variant
Chr6:72626251 Rr632259 1308 bp distal
Tcf7l1 Intron
Tcf7l1 Noncoding-Transcript-Variant
SNP C/G C C C C C C C C C C C C C C C C C C G G C C G C C C C G G C C C C G G C C C C C G G G C C C C C G C C C C
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Showing SNP(s) 1 - 100 of 129

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory

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