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Mouse SNP Summary
Symbol
Name
ID 		Rr634129
regulatory region 634129
MGI:8096261

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229898470
MGI SNP Detail
Alliance Variant		 Chr6:89388308 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1996 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs256188426
MGI SNP Detail
Alliance Variant		 Chr6:89388309 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1995 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215165211
MGI SNP Detail
Alliance Variant		 Chr6:89388311 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1993 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234405459
MGI SNP Detail
Alliance Variant		 Chr6:89388312 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1992 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs247718539
MGI SNP Detail
Alliance Variant		 Chr6:89388332 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1972 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217183553
MGI SNP Detail
Alliance Variant		 Chr6:89388349 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1955 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30954631
MGI SNP Detail
Alliance Variant		 Chr6:89388373 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1931 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs255751616
MGI SNP Detail
Alliance Variant		 Chr6:89388440 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1864 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221351521
MGI SNP Detail
Alliance Variant		 Chr6:89388522 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1782 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236458866
MGI SNP Detail
Alliance Variant		 Chr6:89388546 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1758 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262682088
MGI SNP Detail
Alliance Variant		 Chr6:89388554 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1750 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221074168
MGI SNP Detail
Alliance Variant		 Chr6:89388590 Chchd6 Intron
Gm52910 within coordinates of
Rr634129 1714 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs587364392
MGI SNP Detail
Alliance Variant		 Chr6:89388695 Chchd6 Intron
Rr634129 1609 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584874328
MGI SNP Detail
Alliance Variant		 Chr6:89389143 Chchd6 Intron
Rr634129 1161 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244180567
MGI SNP Detail
Alliance Variant		 Chr6:89389193 Chchd6 Intron
Rr634129 1111 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587281379
MGI SNP Detail
Alliance Variant		 Chr6:89389219 Chchd6 Intron
Rr634129 1085 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262031676
MGI SNP Detail
Alliance Variant		 Chr6:89389256 Chchd6 Intron
Rr634129 1048 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230107597
MGI SNP Detail
Alliance Variant		 Chr6:89389267 Chchd6 Intron
Rr634129 1037 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243952010
MGI SNP Detail
Alliance Variant		 Chr6:89389275 Chchd6 Intron
Rr634129 1029 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs30954632
MGI SNP Detail
Alliance Variant		 Chr6:89389321 Chchd6 Intron
Rr634129 983 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs228065360
MGI SNP Detail
Alliance Variant		 Chr6:89389486 Chchd6 Intron
Rr634128 within coordinates of
Rr634129 818 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30955554
MGI SNP Detail
Alliance Variant		 Chr6:89389883 Chchd6 Intron
Rr634128 within coordinates of
Rr634129 421 bp proximal
 SNP A/C A A A A A A C A A A A A A A
rs30955555
MGI SNP Detail
Alliance Variant		 Chr6:89389915 Chchd6 Intron
Rr634128 within coordinates of
Rr634129 389 bp proximal
 SNP C/T T T T T T T C T T T T T T T
rs227414814
MGI SNP Detail
Alliance Variant		 Chr6:89390035 Chchd6 Intron
Rr634128 within coordinates of
Rr634129 269 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253908877
MGI SNP Detail
Alliance Variant		 Chr6:89390055 Chchd6 Intron
Rr634128 within coordinates of
Rr634129 249 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213473377
MGI SNP Detail
Alliance Variant		 Chr6:89390138 Chchd6 Intron
Rr634129 166 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238484146
MGI SNP Detail
Alliance Variant		 Chr6:89390220 Chchd6 Intron
Rr634129 84 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250718660
MGI SNP Detail
Alliance Variant		 Chr6:89390226 Chchd6 Intron
Rr634129 78 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215564086
MGI SNP Detail
Alliance Variant		 Chr6:89390262 Chchd6 Intron
Rr634129 42 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233871506
MGI SNP Detail
Alliance Variant		 Chr6:89390270 Chchd6 Intron
Rr634129 34 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252684021
MGI SNP Detail
Alliance Variant		 Chr6:89390365 Chchd6 Intron
Rr634129 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581104768
MGI SNP Detail
Alliance Variant		 Chr6:89390418 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30955557
MGI SNP Detail
Alliance Variant		 Chr6:89390449 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/T C C C C C C T C C C C C C C C
rs241273023
MGI SNP Detail
Alliance Variant		 Chr6:89390457 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261678488
MGI SNP Detail
Alliance Variant		 Chr6:89390531 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222720940
MGI SNP Detail
Alliance Variant		 Chr6:89390550 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246757379
MGI SNP Detail
Alliance Variant		 Chr6:89390551 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258938269
MGI SNP Detail
Alliance Variant		 Chr6:89390562 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228085722
MGI SNP Detail
Alliance Variant		 Chr6:89390575 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241930288
MGI SNP Detail
Alliance Variant		 Chr6:89390753 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261246894
MGI SNP Detail
Alliance Variant		 Chr6:89390897 Chchd6 Intron
Rr634129 within coordinates of
Tssr57623 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227786608
MGI SNP Detail
Alliance Variant		 Chr6:89390982 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A G A A A A A A A G A A G A G A G
rs249548686
MGI SNP Detail
Alliance Variant		 Chr6:89391092 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213965043
MGI SNP Detail
Alliance Variant		 Chr6:89391506 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230675661
MGI SNP Detail
Alliance Variant		 Chr6:89391522 Chchd6 Intron
Rr634129 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244811843
MGI SNP Detail
Alliance Variant		 Chr6:89391623 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215409490
MGI SNP Detail
Alliance Variant		 Chr6:89391661 Chchd6 Intron
Rr634129 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G
rs233813012
MGI SNP Detail
Alliance Variant		 Chr6:89391749 Chchd6 Intron
Rr634129 44 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs252911441
MGI SNP Detail
Alliance Variant		 Chr6:89391782 Chchd6 Intron
Rr634129 77 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219738051
MGI SNP Detail
Alliance Variant		 Chr6:89391786 Chchd6 Intron
Rr634129 81 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236388658
MGI SNP Detail
Alliance Variant		 Chr6:89392145 Chchd6 Intron
Rr634129 440 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256324126
MGI SNP Detail
Alliance Variant		 Chr6:89392201 Chchd6 Intron
Rr634129 496 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T C T T T T T T T C T T C T C T C
rs30955559
MGI SNP Detail
Alliance Variant		 Chr6:89392241 Chchd6 Intron
Rr634129 536 bp distal
 SNP C/T T T T T T T T T T C T T T T
rs239851131
MGI SNP Detail
Alliance Variant		 Chr6:89392253 Chchd6 Intron
Rr634129 548 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252691973
MGI SNP Detail
Alliance Variant		 Chr6:89392388 Chchd6 Intron
Rr634129 683 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30955561
MGI SNP Detail
Alliance Variant		 Chr6:89392404 Chchd6 Intron
Rr634129 699 bp distal
 SNP C/T C C C C C C T C C C C C C C
rs241871518
MGI SNP Detail
Alliance Variant		 Chr6:89392458 Chchd6 Intron
Rr634129 753 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261275593
MGI SNP Detail
Alliance Variant		 Chr6:89392541 Chchd6 Intron
Rr634129 836 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220348694
MGI SNP Detail
Alliance Variant		 Chr6:89392655 Chchd6 Intron
Rr634129 950 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30955563
MGI SNP Detail
Alliance Variant		 Chr6:89392702 Chchd6 Intron
Rr634129 997 bp distal
 SNP C/T T T T T T T C T T T T T T T
rs262185993
MGI SNP Detail
Alliance Variant		 Chr6:89392861 Chchd6 Intron
Rr634129 1156 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230908970
MGI SNP Detail
Alliance Variant		 Chr6:89392876 Chchd6 Intron
Rr634129 1171 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245107312
MGI SNP Detail
Alliance Variant		 Chr6:89392926 Chchd6 Intron
Rr634129 1221 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257845914
MGI SNP Detail
Alliance Variant		 Chr6:89392965 Chchd6 Intron
Rr634129 1260 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227849087
MGI SNP Detail
Alliance Variant		 Chr6:89393074 Chchd6 Intron
Rr634129 1369 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246928505
MGI SNP Detail
Alliance Variant		 Chr6:89393084 Chchd6 Intron
Rr634129 1379 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219599316
MGI SNP Detail
Alliance Variant		 Chr6:89393119 Chchd6 Intron
Rr634129 1414 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235007668
MGI SNP Detail
Alliance Variant		 Chr6:89393162 Chchd6 Intron
Rr634129 1457 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254312481
MGI SNP Detail
Alliance Variant		 Chr6:89393168 Chchd6 Intron
Rr634129 1463 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584756428
MGI SNP Detail
Alliance Variant		 Chr6:89393225 Chchd6 Intron
Rr634129 1520 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs213787354
MGI SNP Detail
Alliance Variant		 Chr6:89393643 Chchd6 Intron
Rr634129 1938 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 71 of 71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory