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Mouse SNP Summary
Symbol
Name
ID
Rr634194
regulatory region 634194
MGI:8096326

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226742115
MGI SNP Detail
Alliance Variant
Chr6:90397683 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1987 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246709085
MGI SNP Detail
Alliance Variant
Chr6:90397684 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1986 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215967107
MGI SNP Detail
Alliance Variant
Chr6:90397692 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1978 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228613786
MGI SNP Detail
Alliance Variant
Chr6:90397698 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1972 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260147716
MGI SNP Detail
Alliance Variant
Chr6:90397699 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1971 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212035446
MGI SNP Detail
Alliance Variant
Chr6:90397815 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1855 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237049038
MGI SNP Detail
Alliance Variant
Chr6:90397859 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1811 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A G A A A G A A A A A A A A A A A G A A G A A G A
rs256980146
MGI SNP Detail
Alliance Variant
Chr6:90397898 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1772 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A G A A A G A A A A A A A A A A A G A A G A A G A
rs214146063
MGI SNP Detail
Alliance Variant
Chr6:90397899 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1771 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232639026
MGI SNP Detail
Alliance Variant
Chr6:90397993 Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1677 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251776772
MGI SNP Detail
Alliance Variant
Chr6:90398135 Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1535 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221748310
MGI SNP Detail
Alliance Variant
Chr6:90398143 Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1527 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T T T T T T T T T C T T C T T T T
rs234890940
MGI SNP Detail
Alliance Variant
Chr6:90398161 Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1509 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs264405278
MGI SNP Detail
Alliance Variant
Chr6:90398162 Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1508 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220918362
MGI SNP Detail
Alliance Variant
Chr6:90398270 Cfap100 Coding-Synonymous
Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1400 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245314677
MGI SNP Detail
Alliance Variant
Chr6:90398308 Cfap100 Coding-Synonymous
Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1362 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262506051
MGI SNP Detail
Alliance Variant
Chr6:90398361 Cfap100 Coding-NonSynonymous
Cfap100 Intron
Cfap100 mRNA-UTR
Cfap100 Noncoding-Transcript-Variant
Rr634194 1309 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220572106
MGI SNP Detail
Alliance Variant
Chr6:90398522 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1148 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240690438
MGI SNP Detail
Alliance Variant
Chr6:90398567 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1103 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260136603
MGI SNP Detail
Alliance Variant
Chr6:90398570 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1100 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228565389
MGI SNP Detail
Alliance Variant
Chr6:90398620 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1050 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254781689
MGI SNP Detail
Alliance Variant
Chr6:90398676 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 994 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264636966
MGI SNP Detail
Alliance Variant
Chr6:90398685 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 985 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228738748
MGI SNP Detail
Alliance Variant
Chr6:90398713 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 957 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255259872
MGI SNP Detail
Alliance Variant
Chr6:90398748 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 922 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T C T T T T T T T T T T T C T T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214255028
MGI SNP Detail
Alliance Variant
Chr6:90398775 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 895 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232783127
MGI SNP Detail
Alliance Variant
Chr6:90398782 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 888 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C A C A A C C C C A C C C C A C C C C C C C C C C C A C C A C C A C
rs245770159
MGI SNP Detail
Alliance Variant
Chr6:90398796 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 874 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216472096
MGI SNP Detail
Alliance Variant
Chr6:90398874 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 796 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242608761
MGI SNP Detail
Alliance Variant
Chr6:90398908 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 762 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255193008
MGI SNP Detail
Alliance Variant
Chr6:90398921 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 749 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs579258864
MGI SNP Detail
Alliance Variant
Chr6:90399016 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 654 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs581250703
MGI SNP Detail
Alliance Variant
Chr6:90399025 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 645 bp proximal
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584752623
MGI SNP Detail
Alliance Variant
Chr6:90399027 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 643 bp proximal
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs220719820
MGI SNP Detail
Alliance Variant
Chr6:90399061 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 609 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235763486
MGI SNP Detail
Alliance Variant
Chr6:90399063 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 607 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs262238944
MGI SNP Detail
Alliance Variant
Chr6:90399156 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 514 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220535745
MGI SNP Detail
Alliance Variant
Chr6:90399183 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 487 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240797826
MGI SNP Detail
Alliance Variant
Chr6:90399204 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 466 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T C T T T C T T T T T T T T T T T C T T C T T C T
rs260054508
MGI SNP Detail
Alliance Variant
Chr6:90399284 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 386 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222882157
MGI SNP Detail
Alliance Variant
Chr6:90399357 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 313 bp proximal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251361057
MGI SNP Detail
Alliance Variant
Chr6:90399400 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 270 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578737248
MGI SNP Detail
Alliance Variant
Chr6:90399445 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 225 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs261547699
MGI SNP Detail
Alliance Variant
Chr6:90399516 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 154 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229357985
MGI SNP Detail
Alliance Variant
Chr6:90399534 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 136 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250678005
MGI SNP Detail
Alliance Variant
Chr6:90399567 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 103 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256327747
MGI SNP Detail
Alliance Variant
Chr6:90399576 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 94 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226684965
MGI SNP Detail
Alliance Variant
Chr6:90399579 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 91 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245868038
MGI SNP Detail
Alliance Variant
Chr6:90399654 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 16 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T C T T T T T T T T T T T C T T C T T C T
rs216436001
MGI SNP Detail
Alliance Variant
Chr6:90399719 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 28 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240064568
MGI SNP Detail
Alliance Variant
Chr6:90399778 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 87 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252236818
MGI SNP Detail
Alliance Variant
Chr6:90399789 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 98 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C G G C C C C G C C C C C G C C C C C C C C C C C G C C G C C C C
rs212495931
MGI SNP Detail
Alliance Variant
Chr6:90399865 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 174 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237706109
MGI SNP Detail
Alliance Variant
Chr6:90399871 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 180 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251520109
MGI SNP Detail
Alliance Variant
Chr6:90399876 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 185 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214767820
MGI SNP Detail
Alliance Variant
Chr6:90399893 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 202 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582301080
MGI SNP Detail
Alliance Variant
Chr6:90399905 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 214 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs234233724
MGI SNP Detail
Alliance Variant
Chr6:90399980 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 289 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253872917
MGI SNP Detail
Alliance Variant
Chr6:90400014 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 323 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs226558044
MGI SNP Detail
Alliance Variant
Chr6:90400015 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 324 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248494814
MGI SNP Detail
Alliance Variant
Chr6:90400021 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 330 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261069830
MGI SNP Detail
Alliance Variant
Chr6:90400036 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 345 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221641528
MGI SNP Detail
Alliance Variant
Chr6:90400126 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 435 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T C T T T C T T T T T T T T T T T C T T C T T C T
rs246051795
MGI SNP Detail
Alliance Variant
Chr6:90400139 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 448 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256228686
MGI SNP Detail
Alliance Variant
Chr6:90400187 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 496 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226839859
MGI SNP Detail
Alliance Variant
Chr6:90400191 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 500 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240035315
MGI SNP Detail
Alliance Variant
Chr6:90400259 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 568 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258820039
MGI SNP Detail
Alliance Variant
Chr6:90400281 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634193 within coordinates of
Rr634194 590 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs234900566
MGI SNP Detail
Alliance Variant
Chr6:90400331 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 640 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248950815
MGI SNP Detail
Alliance Variant
Chr6:90400378 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 687 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212997855
MGI SNP Detail
Alliance Variant
Chr6:90400413 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 722 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229379746
MGI SNP Detail
Alliance Variant
Chr6:90400438 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 747 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C
rs245460313
MGI SNP Detail
Alliance Variant
Chr6:90400459 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 768 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T G
rs214729806
MGI SNP Detail
Alliance Variant
Chr6:90400486 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 795 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T C T T T C T T T T T T T T T T T C T T C T T C T
rs234344676
MGI SNP Detail
Alliance Variant
Chr6:90400515 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 824 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253975413
MGI SNP Detail
Alliance Variant
Chr6:90400533 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 842 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218417228
MGI SNP Detail
Alliance Variant
Chr6:90400585 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 894 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T T T T T T T T T C T T C T T T T
rs243430922
MGI SNP Detail
Alliance Variant
Chr6:90400587 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 896 bp distal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255620581
MGI SNP Detail
Alliance Variant
Chr6:90400590 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 899 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221293210
MGI SNP Detail
Alliance Variant
Chr6:90400674 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 983 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237627828
MGI SNP Detail
Alliance Variant
Chr6:90400679 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 988 bp distal
SNP A/G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250570697
MGI SNP Detail
Alliance Variant
Chr6:90400687 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 996 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220849436
MGI SNP Detail
Alliance Variant
Chr6:90400688 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 997 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs239999482
MGI SNP Detail
Alliance Variant
Chr6:90400707 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1016 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259024575
MGI SNP Detail
Alliance Variant
Chr6:90400867 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1176 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233706755
MGI SNP Detail
Alliance Variant
Chr6:90400963 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1272 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A G A
rs243856216
MGI SNP Detail
Alliance Variant
Chr6:90401139 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1448 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261814541
MGI SNP Detail
Alliance Variant
Chr6:90401148 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1457 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs229959889
MGI SNP Detail
Alliance Variant
Chr6:90401153 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1462 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245555751
MGI SNP Detail
Alliance Variant
Chr6:90401181 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1490 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214835636
MGI SNP Detail
Alliance Variant
Chr6:90401197 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1506 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227861277
MGI SNP Detail
Alliance Variant
Chr6:90401315 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1624 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247602782
MGI SNP Detail
Alliance Variant
Chr6:90401357 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1666 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T G T
rs218577767
MGI SNP Detail
Alliance Variant
Chr6:90401372 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1681 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240548278
MGI SNP Detail
Alliance Variant
Chr6:90401381 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1690 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T A T
rs253219797
MGI SNP Detail
Alliance Variant
Chr6:90401470 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1779 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212969745
MGI SNP Detail
Alliance Variant
Chr6:90401497 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1806 bp distal
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231552444
MGI SNP Detail
Alliance Variant
Chr6:90401498 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1807 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A G A A A G A A A A A A A A A A A G A A A A G A
rs48786687
MGI SNP Detail
Alliance Variant
Chr6:90401539 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1848 bp distal
SNP A/G A G A
rs578549862
MGI SNP Detail
Alliance Variant
Chr6:90401590 Cfap100 Intron
Cfap100 Noncoding-Transcript-Variant
Rr634194 1899 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 100

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory