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Mouse SNP Summary
Symbol
Name
ID 		Rr634323
regulatory region 634323
MGI:8096455

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212219253
MGI SNP Detail
Alliance Variant		 Chr6:90753878 Iqsec1 Intron
Rr634323 1954 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C
rs235329956
MGI SNP Detail
Alliance Variant		 Chr6:90753939 Iqsec1 Intron
Rr634323 1893 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583509921
MGI SNP Detail
Alliance Variant		 Chr6:90754016 Iqsec1 Intron
Rr634323 1816 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585777353
MGI SNP Detail
Alliance Variant		 Chr6:90754043 Iqsec1 Intron
Rr634323 1789 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261961557
MGI SNP Detail
Alliance Variant		 Chr6:90754065 Iqsec1 Intron
Rr634323 1767 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223105077
MGI SNP Detail
Alliance Variant		 Chr6:90754072 Iqsec1 Intron
Rr634323 1760 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30024833
MGI SNP Detail
Alliance Variant		 Chr6:90754101 Iqsec1 Intron
Rr634323 1731 bp proximal
 SNP A/G G A G A G
rs251643503
MGI SNP Detail
Alliance Variant		 Chr6:90754176 Iqsec1 Intron
Rr634323 1656 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221723750
MGI SNP Detail
Alliance Variant		 Chr6:90754178 Iqsec1 Intron
Rr634323 1654 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241256340
MGI SNP Detail
Alliance Variant		 Chr6:90754221 Iqsec1 Intron
Rr634323 1611 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264589990
MGI SNP Detail
Alliance Variant		 Chr6:90754228 Iqsec1 Intron
Rr634323 1604 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G
rs220576430
MGI SNP Detail
Alliance Variant		 Chr6:90754234 Iqsec1 Intron
Rr634323 1598 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C T C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C
rs242489637
MGI SNP Detail
Alliance Variant		 Chr6:90754285 Iqsec1 Intron
Rr634323 1547 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs37893146
MGI SNP Detail
Alliance Variant		 Chr6:90754343 Iqsec1 Intron
Rr634323 1489 bp proximal
 SNP A/G A A A A A A G A A A G A A A A
rs226727623
MGI SNP Detail
Alliance Variant		 Chr6:90754397 Iqsec1 Intron
Rr634323 1435 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246715062
MGI SNP Detail
Alliance Variant		 Chr6:90754526 Iqsec1 Intron
Rr634323 1306 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A A A A A A G A A G A A A A
rs260104980
MGI SNP Detail
Alliance Variant		 Chr6:90754539 Iqsec1 Intron
Rr634323 1293 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228561483
MGI SNP Detail
Alliance Variant		 Chr6:90754542 Iqsec1 Intron
Rr634323 1290 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36468272
MGI SNP Detail
Alliance Variant		 Chr6:90754620 Iqsec1 Intron
Rr634323 1212 bp proximal
 SNP A/G G G G G G G G G G G A G G G G
rs248908160
MGI SNP Detail
Alliance Variant		 Chr6:90754642 Iqsec1 Intron
Rr634323 1190 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212006315
MGI SNP Detail
Alliance Variant		 Chr6:90754643 Iqsec1 Intron
Rr634323 1189 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs237284105
MGI SNP Detail
Alliance Variant		 Chr6:90754645 Iqsec1 Intron
Rr634323 1187 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250582256
MGI SNP Detail
Alliance Variant		 Chr6:90754647 Iqsec1 Intron
Rr634323 1185 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215038880
MGI SNP Detail
Alliance Variant		 Chr6:90754709 Iqsec1 Intron
Rr634323 1123 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G
rs232750723
MGI SNP Detail
Alliance Variant		 Chr6:90754725 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1107 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108595640
MGI SNP Detail
Alliance Variant		 Chr6:90754731 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1101 bp proximal
 SNP T T T T
rs216481717
MGI SNP Detail
Alliance Variant		 Chr6:90754744 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1088 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A T A A T A A A A
rs234812500
MGI SNP Detail
Alliance Variant		 Chr6:90754769 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1063 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260652356
MGI SNP Detail
Alliance Variant		 Chr6:90754868 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 964 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220887664
MGI SNP Detail
Alliance Variant		 Chr6:90754870 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 962 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245528574
MGI SNP Detail
Alliance Variant		 Chr6:90754901 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 931 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579814918
MGI SNP Detail
Alliance Variant		 Chr6:90754913 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 919 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583264951
MGI SNP Detail
Alliance Variant		 Chr6:90755004 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 828 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T C T T T T T T T T T T T C T T C T T T T
rs257343385
MGI SNP Detail
Alliance Variant		 Chr6:90755087 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 745 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T G T T T T T G T T T T T G T T T T T T T T T T T G T T G T T T T
rs220504028
MGI SNP Detail
Alliance Variant		 Chr6:90755107 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 725 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs29973033
MGI SNP Detail
Alliance Variant		 Chr6:90755122 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 710 bp proximal
 SNP C/T T T T C T C T
rs260073474
MGI SNP Detail
Alliance Variant		 Chr6:90755138 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 694 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228679593
MGI SNP Detail
Alliance Variant		 Chr6:90755246 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 586 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248387961
MGI SNP Detail
Alliance Variant		 Chr6:90755272 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 560 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264683481
MGI SNP Detail
Alliance Variant		 Chr6:90755360 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 472 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228714953
MGI SNP Detail
Alliance Variant		 Chr6:90755362 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 470 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255181049
MGI SNP Detail
Alliance Variant		 Chr6:90755391 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 441 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214738722
MGI SNP Detail
Alliance Variant		 Chr6:90755403 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 429 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226696669
MGI SNP Detail
Alliance Variant		 Chr6:90755440 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 392 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245877721
MGI SNP Detail
Alliance Variant		 Chr6:90755443 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 389 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G A G G G G G G G G G G G A G G A G G G G
rs36576294
MGI SNP Detail
Alliance Variant		 Chr6:90755566 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 266 bp proximal
 SNP A/G A A A A A A G A A A A A A A A
rs234987566
MGI SNP Detail
Alliance Variant		 Chr6:90755620 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 212 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37691193
MGI SNP Detail
Alliance Variant		 Chr6:90755635 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 197 bp proximal
 SNP A/G A A A A A A G A A A A A A A A
rs212912215
MGI SNP Detail
Alliance Variant		 Chr6:90755657 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 175 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235882425
MGI SNP Detail
Alliance Variant		 Chr6:90755670 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 162 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36984021
MGI SNP Detail
Alliance Variant		 Chr6:90755844 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP C/T C C C T T C C C C C C T C C C C C T
rs220653173
MGI SNP Detail
Alliance Variant		 Chr6:90755871 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240756613
MGI SNP Detail
Alliance Variant		 Chr6:90755921 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253885322
MGI SNP Detail
Alliance Variant		 Chr6:90756025 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37398574
MGI SNP Detail
Alliance Variant		 Chr6:90756073 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP A/G G G G G G G G G G G A G G G G
rs222852927
MGI SNP Detail
Alliance Variant		 Chr6:90756102 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G
rs251671040
MGI SNP Detail
Alliance Variant		 Chr6:90756145 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C
rs261629957
MGI SNP Detail
Alliance Variant		 Chr6:90756151 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229265675
MGI SNP Detail
Alliance Variant		 Chr6:90756192 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C
rs29922423
MGI SNP Detail
Alliance Variant		 Chr6:90756227 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 10 bp distal
 SNP C/T T T C T C T
rs256238214
MGI SNP Detail
Alliance Variant		 Chr6:90756337 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 120 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37241565
MGI SNP Detail
Alliance Variant		 Chr6:90756394 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 177 bp distal
 SNP A/G G G G G G G G G G G A G G G G
rs226850019
MGI SNP Detail
Alliance Variant		 Chr6:90756428 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 211 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs38166381
MGI SNP Detail
Alliance Variant		 Chr6:90756596 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 379 bp distal
 SNP C/T T T T T T T T T T T C T T T T
rs216602408
MGI SNP Detail
Alliance Variant		 Chr6:90756650 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 433 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233647507
MGI SNP Detail
Alliance Variant		 Chr6:90756702 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 485 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252143516
MGI SNP Detail
Alliance Variant		 Chr6:90756785 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 568 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs40076023
MGI SNP Detail
Alliance Variant		 Chr6:90757041 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 824 bp distal
 SNP A/C C C A A C C C C C C A C C C C C A
rs37320359
MGI SNP Detail
Alliance Variant		 Chr6:90757102 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 885 bp distal
 SNP C/T C C C C C C T C C C T C C C C
rs251207033
MGI SNP Detail
Alliance Variant		 Chr6:90757210 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 993 bp distal
 SNP A/C/G C C C C C C C A A C C A G C
rs38328753
MGI SNP Detail
Alliance Variant		 Chr6:90757283 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1066 bp distal
 SNP C/T C C C C C C C C C C T C C C C
rs6267887
MGI SNP Detail
Alliance Variant		 Chr6:90757388 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1171 bp distal
 SNP A/G G G G G G G G G A G G G A G G G G
rs214747264
MGI SNP Detail
Alliance Variant		 Chr6:90757413 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1196 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234400079
MGI SNP Detail
Alliance Variant		 Chr6:90757469 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr634323 1252 bp distal
 SNP G/T T T G G
rs37775941
MGI SNP Detail
Alliance Variant		 Chr6:90757509 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1292 bp distal
 SNP C/T C C C T C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6281195
MGI SNP Detail
Alliance Variant		 Chr6:90757567 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1350 bp distal
 SNP C/T T T T T T T T C C T T T C T T T T
rs222920277
MGI SNP Detail
Alliance Variant		 Chr6:90757579 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1362 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240603282
MGI SNP Detail
Alliance Variant		 Chr6:90757581 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1364 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261008232
MGI SNP Detail
Alliance Variant		 Chr6:90757655 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1438 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221835554
MGI SNP Detail
Alliance Variant		 Chr6:90757836 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1619 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586228427
MGI SNP Detail
Alliance Variant		 Chr6:90757899 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1682 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36904147
MGI SNP Detail
Alliance Variant		 Chr6:90757975 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1758 bp distal
 SNP A/G A A G G A A G A A A G G A A A A G
rs256429465
MGI SNP Detail
Alliance Variant		 Chr6:90757995 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1778 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A A A A A A G A A G A A A A
rs220729775
MGI SNP Detail
Alliance Variant		 Chr6:90758014 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1797 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs240044333
MGI SNP Detail
Alliance Variant		 Chr6:90758030 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1813 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C T T C C C C T C C C C C T C C C C C C C C C C C T C C T C C C C
rs52581152
MGI SNP Detail
Alliance Variant		 Chr6:90758085 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1868 bp distal
 SNP A/C C A C
rs582368420
MGI SNP Detail
Alliance Variant		 Chr6:90758126 E130314K07Rik within coordinates of
Iqsec1 Intron
Rr1762 within coordinates of
Rr634323 1909 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 87 of 87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory