Rr635949 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Rr635949
regulatory region 635949
MGI:8098081

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Showing SNP(s) 1 - 100 of 117

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs217513751 MGI SNP Detail Alliance Variant	Chr6:106474137	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1988 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs232977840 MGI SNP Detail Alliance Variant	Chr6:106474150	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1975 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs252117631 MGI SNP Detail Alliance Variant	Chr6:106474173	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1952 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs214266460 MGI SNP Detail Alliance Variant	Chr6:106474219	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1906 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs237052053 MGI SNP Detail Alliance Variant	Chr6:106474238	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1887 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs260981000 MGI SNP Detail Alliance Variant	Chr6:106474239	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1886 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs221463376 MGI SNP Detail Alliance Variant	Chr6:106474267	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1858 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs235514970 MGI SNP Detail Alliance Variant	Chr6:106474294	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1831 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs255091949 MGI SNP Detail Alliance Variant	Chr6:106474351	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1774 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs30357411 MGI SNP Detail Alliance Variant	Chr6:106474449	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1676 bp proximal	SNP	A/C		C		C	C	C		C					C			A					C					C	C			C		C			A	A						C								C				C
rs241052338 MGI SNP Detail Alliance Variant	Chr6:106474450	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1675 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs262242523 MGI SNP Detail Alliance Variant	Chr6:106474467	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1658 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs222911499 MGI SNP Detail Alliance Variant	Chr6:106474593	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1532 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C		T	C	C	C	C
rs240796298 MGI SNP Detail Alliance Variant	Chr6:106474601	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1524 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C		C	C	C		T	C	C	C	C
rs264788365 MGI SNP Detail Alliance Variant	Chr6:106474612	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1513 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G		G	G	G	G	T	G	G	G	G
rs224769216 MGI SNP Detail Alliance Variant	Chr6:106474615	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1510 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T	T		T	T	T	T	G	T	T	T	T
rs247057026 MGI SNP Detail Alliance Variant	Chr6:106474631	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1494 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs260117365 MGI SNP Detail Alliance Variant	Chr6:106474642	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1483 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs227108400 MGI SNP Detail Alliance Variant	Chr6:106474661	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1464 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs258642862 MGI SNP Detail Alliance Variant	Chr6:106474696	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1429 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs30961400 MGI SNP Detail Alliance Variant	Chr6:106474721	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1404 bp proximal	SNP	A/G		A		A	A	A		A		G			A			G					G					A	G			A					G	G				A		G												G
rs239239276 MGI SNP Detail Alliance Variant	Chr6:106474730	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1395 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs249179858 MGI SNP Detail Alliance Variant	Chr6:106474854	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1271 bp proximal	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs212954900 MGI SNP Detail Alliance Variant	Chr6:106474856	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1269 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs30766701 MGI SNP Detail Alliance Variant	Chr6:106474914	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1211 bp proximal	SNP	A/C				A	A											C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs30448220 MGI SNP Detail Alliance Variant	Chr6:106474916	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1209 bp proximal	SNP	C/T				C	C	C				C			C			T					T					C	C			C		C			T	T														C				C
rs221022106 MGI SNP Detail Alliance Variant	Chr6:106474923	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1202 bp proximal	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		C	G	G	G	G	G	G	G	G	G	G	G	G
rs581271824 MGI SNP Detail Alliance Variant	Chr6:106474924	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1201 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs30661296 MGI SNP Detail Alliance Variant	Chr6:106474941	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1184 bp proximal	SNP	C/G				C	C											G																C																		C
rs261964839 MGI SNP Detail Alliance Variant	Chr6:106474969	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1156 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs584998904 MGI SNP Detail Alliance Variant	Chr6:106474988	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1137 bp proximal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs36695162 MGI SNP Detail Alliance Variant	Chr6:106475013	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1112 bp proximal	SNP	A/G				A	A	A		A		G			A														G								G	G				G		G
rs36357084 MGI SNP Detail Alliance Variant	Chr6:106475118	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1007 bp proximal	SNP	G/T		G			G	G		G		G			G								T					G	G			G					G	G				G		G												G
rs36843733 MGI SNP Detail Alliance Variant	Chr6:106475137	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 988 bp proximal	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												C
rs37011224 MGI SNP Detail Alliance Variant	Chr6:106475143	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 982 bp proximal	SNP	G/T		T			T	T		T		T			T								T					T	T			T					T	T				T		G												T
rs30064756 MGI SNP Detail Alliance Variant	Chr6:106475171	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 954 bp proximal	SNP	A/G		A		A	A	A		A		G			A			G					G					A	G			A					G	G				A		G												G
rs38565237 MGI SNP Detail Alliance Variant	Chr6:106475172	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 953 bp proximal	SNP	G/T					T	T				T											T						T			T					T	T						G												T
rs227213093 MGI SNP Detail Alliance Variant	Chr6:106475251	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 874 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs253417284 MGI SNP Detail Alliance Variant	Chr6:106475308	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 817 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs265157385 MGI SNP Detail Alliance Variant	Chr6:106475326	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 799 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs231029935 MGI SNP Detail Alliance Variant	Chr6:106475331	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 794 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs36311008 MGI SNP Detail Alliance Variant	Chr6:106475346	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 779 bp proximal	SNP	C/T		T		T	T	T		T		C			T								C					T	C			T					C	C				T		C												C
rs38216122 MGI SNP Detail Alliance Variant	Chr6:106475355	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 770 bp proximal	SNP	A/G					G	G				G											A						G			G					G	G						G												G
rs235580275 MGI SNP Detail Alliance Variant	Chr6:106475463	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 662 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs248914559 MGI SNP Detail Alliance Variant	Chr6:106475466	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 659 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs581662884 MGI SNP Detail Alliance Variant	Chr6:106475475	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 650 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs215144479 MGI SNP Detail Alliance Variant	Chr6:106475493	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 632 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs585272716 MGI SNP Detail Alliance Variant	Chr6:106475495	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 630 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs578362184 MGI SNP Detail Alliance Variant	Chr6:106475501	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 624 bp proximal	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	A	T	T	T	T
rs581978755 MGI SNP Detail Alliance Variant	Chr6:106475516	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 609 bp proximal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs585348306 MGI SNP Detail Alliance Variant	Chr6:106475518	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 607 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs578741738 MGI SNP Detail Alliance Variant	Chr6:106475519	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 606 bp proximal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs241085101 MGI SNP Detail Alliance Variant	Chr6:106475539	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 586 bp proximal	SNP	A/G/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs30902799 MGI SNP Detail Alliance Variant	Chr6:106475630	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 495 bp proximal	SNP	A/G				G	G											A										G
rs30068690 MGI SNP Detail Alliance Variant	Chr6:106475647	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 478 bp proximal	SNP	A/G		G		G	G											A										G						G																		G
rs30467684 MGI SNP Detail Alliance Variant	Chr6:106475651	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 474 bp proximal	SNP	A/G		A		A	A											G										A						A																		A
rs248716768 MGI SNP Detail Alliance Variant	Chr6:106475652	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 473 bp proximal	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs221833055 MGI SNP Detail Alliance Variant	Chr6:106475690	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 435 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs241240973 MGI SNP Detail Alliance Variant	Chr6:106475693	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 432 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs250970227 MGI SNP Detail Alliance Variant	Chr6:106475699	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 426 bp proximal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs221087248 MGI SNP Detail Alliance Variant	Chr6:106475706	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 419 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs249620710 MGI SNP Detail Alliance Variant	Chr6:106475711	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 414 bp proximal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs586107377 MGI SNP Detail Alliance Variant	Chr6:106475754	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 371 bp proximal	SNP	G/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs586687732 MGI SNP Detail Alliance Variant	Chr6:106475759	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 366 bp proximal	SNP	C	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C		C	C	C	C
rs582614846 MGI SNP Detail Alliance Variant	Chr6:106475784	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 341 bp proximal	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs262495636 MGI SNP Detail Alliance Variant	Chr6:106475888	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 237 bp proximal	SNP	A/G	A	A			A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs586431420 MGI SNP Detail Alliance Variant	Chr6:106475986	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 139 bp proximal	SNP	T	T	T			T	T	T	T	T	T			T	T	T	T	T	T		T		T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T			T	T	T	T
rs30319335 MGI SNP Detail Alliance Variant	Chr6:106475996	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 129 bp proximal	SNP	A/G					A											G
rs579464297 MGI SNP Detail Alliance Variant	Chr6:106476016	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 109 bp proximal	SNP	G	G	G			G	G	G	G	G	G		G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G			G	G	G	G
rs583138820 MGI SNP Detail Alliance Variant	Chr6:106476031	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 94 bp proximal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G		G	G	G	G	G
rs30952236 MGI SNP Detail Alliance Variant	Chr6:106476093	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 32 bp proximal	SNP	A/T		A			A	A		A		A			A			T					A					A	A			A		A			T	T				A		A								T				A
rs256927562 MGI SNP Detail Alliance Variant	Chr6:106476097	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 28 bp proximal	SNP	A/C	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		C	A	A	A	A
rs30124365 MGI SNP Detail Alliance Variant	Chr6:106476143	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 within coordinates of	SNP	A/G		A			A	A		A		G			A			G					G					A	G			A					G	G				A		G												G
rs248877942 MGI SNP Detail Alliance Variant	Chr6:106476466	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 32 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs215258543 MGI SNP Detail Alliance Variant	Chr6:106476509	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 75 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs232310426 MGI SNP Detail Alliance Variant	Chr6:106476535	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 101 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs30998416 MGI SNP Detail Alliance Variant	Chr6:106476564	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 130 bp distal	SNP	C/T		T		T	T	T		T		C			T			C					C					T	C			T					C	C				T		C												C
rs37103612 MGI SNP Detail Alliance Variant	Chr6:106476579	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 145 bp distal	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A		A												A
rs236050861 MGI SNP Detail Alliance Variant	Chr6:106476597	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 163 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248832701 MGI SNP Detail Alliance Variant	Chr6:106476879	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 445 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs216454940 MGI SNP Detail Alliance Variant	Chr6:106476909	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 475 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs244524142 MGI SNP Detail Alliance Variant	Chr6:106476936	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 502 bp distal	SNP	C/T																																T																		C
rs250891539 MGI SNP Detail Alliance Variant	Chr6:106476988	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 554 bp distal	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs224802641 MGI SNP Detail Alliance Variant	Chr6:106477017	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 583 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs246838558 MGI SNP Detail Alliance Variant	Chr6:106477032	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 598 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs262199129 MGI SNP Detail Alliance Variant	Chr6:106477155	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 721 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs586954239 MGI SNP Detail Alliance Variant	Chr6:106477185	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 751 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs579906817 MGI SNP Detail Alliance Variant	Chr6:106477189	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 755 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs583616793 MGI SNP Detail Alliance Variant	Chr6:106477190	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 756 bp distal	SNP	A/T	A	A	A		A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A		T	A	A	A	A
rs223846789 MGI SNP Detail Alliance Variant	Chr6:106477206	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 772 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs244348005 MGI SNP Detail Alliance Variant	Chr6:106477232	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 798 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G		A	G	G	G	G
rs257080563 MGI SNP Detail Alliance Variant	Chr6:106477299	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 865 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs228614785 MGI SNP Detail Alliance Variant	Chr6:106477364	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 930 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs242943727 MGI SNP Detail Alliance Variant	Chr6:106477369	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 935 bp distal	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs259132068 MGI SNP Detail Alliance Variant	Chr6:106477395	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 961 bp distal	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs233224687 MGI SNP Detail Alliance Variant	Chr6:106477445	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1011 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs250814510 MGI SNP Detail Alliance Variant	Chr6:106477493	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1059 bp distal	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs6375730 MGI SNP Detail Alliance Variant	Chr6:106477503	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1069 bp distal	SNP	A/G																G								A
rs227648722 MGI SNP Detail Alliance Variant	Chr6:106477520	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1086 bp distal	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs242957989 MGI SNP Detail Alliance Variant	Chr6:106477532	Cntn4 Intron Cntn4 Noncoding-Transcript-Variant Rr635949 1098 bp distal	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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