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Mouse SNP Summary
Symbol
Name
ID 		Rr636490
regulatory region 636490
MGI:8098622

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237498447
MGI SNP Detail
Alliance Variant		 Chr6:113301736 Brpf1 mRNA-UTR
Gm15492 within coordinates of
Rr636490 1947 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242586393
MGI SNP Detail		 Chr6:113301919 Gm15492 within coordinates of
Rr636490 1764 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30422653
MGI SNP Detail		 Chr6:113301943 Gm15492 within coordinates of
Rr636490 1740 bp proximal
 SNP A/C A A A C A C
rs231771669
MGI SNP Detail		 Chr6:113301970 Gm15492 within coordinates of
Rr636490 1713 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236463266
MGI SNP Detail		 Chr6:113301987 Gm15492 within coordinates of
Rr636490 1696 bp proximal
 SNP C/T C T
rs30665283
MGI SNP Detail		 Chr6:113301988 Gm15492 within coordinates of
Rr636490 1695 bp proximal
 SNP C/G G G G C
rs240474325
MGI SNP Detail		 Chr6:113302054 Gm15492 within coordinates of
Rr636490 1629 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263892884
MGI SNP Detail		 Chr6:113302066 Gm15492 within coordinates of
Rr636490 1617 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs221311827
MGI SNP Detail		 Chr6:113302277 Gm15492 within coordinates of
Rr636490 1406 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs243799975
MGI SNP Detail		 Chr6:113302348 Gm15492 within coordinates of
Rr636490 1335 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs258222110
MGI SNP Detail		 Chr6:113302407 Gm15492 within coordinates of
Rr636490 1276 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36689325
MGI SNP Detail		 Chr6:113302427 Gm15492 within coordinates of
Rr636490 1256 bp proximal
 SNP C/T T T T T T T C T C T
rs241254097
MGI SNP Detail		 Chr6:113302441 Gm15492 within coordinates of
Rr636490 1242 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs37022332
MGI SNP Detail		 Chr6:113302506 Gm15492 within coordinates of
Rr636490 1177 bp proximal
 SNP A/G A A A A A A A G A
rs234650010
MGI SNP Detail		 Chr6:113302566 Gm15492 within coordinates of
Rr636490 1117 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37083331
MGI SNP Detail		 Chr6:113302578 Gm15492 within coordinates of
Rr636490 1105 bp proximal
 SNP C/T T T T T T T C T
rs253711188
MGI SNP Detail		 Chr6:113302709 Gm15492 within coordinates of
Rr636490 974 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs264791960
MGI SNP Detail		 Chr6:113302734 Gm15492 within coordinates of
Rr636490 949 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227413215
MGI SNP Detail		 Chr6:113302741 Gm15492 within coordinates of
Rr636490 942 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs36657643
MGI SNP Detail		 Chr6:113302789 Gm15492 within coordinates of
Rr636490 894 bp proximal
 SNP A/T A A A A A T
rs214687117
MGI SNP Detail		 Chr6:113302799 Gm15492 within coordinates of
Rr636490 884 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C
rs585079807
MGI SNP Detail		 Chr6:113302806 Gm15492 within coordinates of
Rr636490 877 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37718286
MGI SNP Detail		 Chr6:113302822 Gm15492 within coordinates of
Rr636490 861 bp proximal
 SNP A/T T T T T T T T T A T
rs246342715
MGI SNP Detail		 Chr6:113302863 Gm15492 within coordinates of
Rr636490 820 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215822678
MGI SNP Detail		 Chr6:113302943 Gm15492 within coordinates of
Rr636490 740 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249434051
MGI SNP Detail		 Chr6:113302953 Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 730 bp proximal
 SNP C/T T C
rs260338888
MGI SNP Detail		 Chr6:113303273 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 410 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221250919
MGI SNP Detail		 Chr6:113303276 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 407 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T
rs230058700
MGI SNP Detail		 Chr6:113303287 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 396 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251869277
MGI SNP Detail		 Chr6:113303434 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 249 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219488786
MGI SNP Detail		 Chr6:113303493 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr636489 within coordinates of
Rr636490 190 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs241237927
MGI SNP Detail		 Chr6:113303560 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 123 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259105707
MGI SNP Detail		 Chr6:113303569 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 114 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226685594
MGI SNP Detail		 Chr6:113303594 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 89 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249689904
MGI SNP Detail		 Chr6:113303620 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 63 bp proximal
Tssr62435 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs261787809
MGI SNP Detail		 Chr6:113303622 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 61 bp proximal
Tssr62435 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T
rs227817758
MGI SNP Detail		 Chr6:113303623 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 60 bp proximal
Tssr62435 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G A G G G G
rs244396313
MGI SNP Detail		 Chr6:113303651 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636489 within coordinates of
Rr636490 32 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256602878
MGI SNP Detail		 Chr6:113303755 Cpgi17839 within coordinates of
Gm15492 within coordinates of
Rr399830 within coordinates of
Rr636490 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T T
rs37596046
MGI SNP Detail		 Chr6:113303810 Cpgi17839 within coordinates of
Rr399830 within coordinates of
Rr636490 within coordinates of
 SNP A/G A A A A A G
rs246309320
MGI SNP Detail		 Chr6:113303832 Cpgi17839 within coordinates of
Rr399830 within coordinates of
Rr636490 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216591986
MGI SNP Detail		 Chr6:113303880 Cpgi17839 within coordinates of
Rr636490 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs234234284
MGI SNP Detail		 Chr6:113303917 Cpgi17839 within coordinates of
Rr636490 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219802398
MGI SNP Detail		 Chr6:113303922 Cpgi17839 within coordinates of
Rr636490 within coordinates of
 SNP C/T T C
rs586932090
MGI SNP Detail
Alliance Variant		 Chr6:113303946 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Rr636490 3 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C
rs259228936
MGI SNP Detail
Alliance Variant		 Chr6:113303952 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Rr636490 9 bp distal
Tssr58194 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580958470
MGI SNP Detail
Alliance Variant		 Chr6:113303959 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 16 bp distal
Tssr58194 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A
rs212921921
MGI SNP Detail
Alliance Variant		 Chr6:113303964 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 21 bp distal
Tssr58194 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230025123
MGI SNP Detail
Alliance Variant		 Chr6:113303973 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 30 bp distal
Tssr58194 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252266607
MGI SNP Detail
Alliance Variant		 Chr6:113303989 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 46 bp distal
Tssr58195 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29970977
MGI SNP Detail
Alliance Variant		 Chr6:113304024 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 81 bp distal
 SNP C/T T T T T T C T C
rs234612552
MGI SNP Detail
Alliance Variant		 Chr6:113304039 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 96 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36857120
MGI SNP Detail
Alliance Variant		 Chr6:113304058 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 115 bp distal
 SNP A/G G G G G G G G G A A G
rs227083940
MGI SNP Detail
Alliance Variant		 Chr6:113304065 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 122 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs247435377
MGI SNP Detail
Alliance Variant		 Chr6:113304079 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 136 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37567622
MGI SNP Detail
Alliance Variant		 Chr6:113304123 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 180 bp distal
 SNP A/T T T T T T T T T A T T
rs217703073
MGI SNP Detail
Alliance Variant		 Chr6:113304130 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 187 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584129088
MGI SNP Detail
Alliance Variant		 Chr6:113304175 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 232 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs238156892
MGI SNP Detail
Alliance Variant		 Chr6:113304185 Cpgi17839 within coordinates of
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 242 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs255182778
MGI SNP Detail
Alliance Variant		 Chr6:113304196 Cpgi17839 within coordinates of
Ogg1 Coding-NonSynonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 253 bp distal
Tssr58196 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227370576
MGI SNP Detail
Alliance Variant		 Chr6:113304245 Cpgi17839 within coordinates of
Ogg1 Coding-NonSynonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 302 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240264942
MGI SNP Detail
Alliance Variant		 Chr6:113304394 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 451 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs263323022
MGI SNP Detail
Alliance Variant		 Chr6:113304417 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 474 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235688900
MGI SNP Detail
Alliance Variant		 Chr6:113304455 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 512 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254316755
MGI SNP Detail
Alliance Variant		 Chr6:113304568 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 625 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213334882
MGI SNP Detail
Alliance Variant		 Chr6:113304595 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 652 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224329539
MGI SNP Detail
Alliance Variant		 Chr6:113304634 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 691 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245804065
MGI SNP Detail
Alliance Variant		 Chr6:113304640 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 697 bp distal
 SNP C/G G G G G G G G G C G G G G G G G C C C C G C C C C G G C G G G G C G C G C C G C G G G G G G G C G G G C
rs213776428
MGI SNP Detail
Alliance Variant		 Chr6:113304649 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 706 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578449350
MGI SNP Detail
Alliance Variant		 Chr6:113304688 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 745 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234980918
MGI SNP Detail
Alliance Variant		 Chr6:113304702 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 759 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582783745
MGI SNP Detail
Alliance Variant		 Chr6:113304728 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 785 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52003096
MGI SNP Detail
Alliance Variant		 Chr6:113304886 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 943 bp distal
 SNP A/C A A A A A A A C A A A A A A A C C C C A C C C C A A C A A A A C A C A C C A C A A A A A A A C A A C
rs50481681
MGI SNP Detail
Alliance Variant		 Chr6:113304905 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 962 bp distal
 SNP C/T C C C C C C C C T C C C C C C C T T T C C T C T T C C C C C C C C C T C T T C C C C C C C C C C C C C T
rs585139737
MGI SNP Detail
Alliance Variant		 Chr6:113304992 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1049 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579381653
MGI SNP Detail
Alliance Variant		 Chr6:113305046 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1103 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582533400
MGI SNP Detail
Alliance Variant		 Chr6:113305061 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1118 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242026316
MGI SNP Detail
Alliance Variant		 Chr6:113305096 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1153 bp distal
 SNP G/T G G G G G G G G T G G G G G G G T T T G G T G T T G G G G G G G G G G T G T T G G G G G G G G G G G G G T
rs585820167
MGI SNP Detail
Alliance Variant		 Chr6:113305107 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1164 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs256291771
MGI SNP Detail
Alliance Variant		 Chr6:113305126 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1183 bp distal
 SNP C/T T T T T T T T T C T T T T T T T C C C T T C T C C T T T T T T T T T T C T C C T T T T T T T T T T T T T C
rs217672688
MGI SNP Detail
Alliance Variant		 Chr6:113305137 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1194 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs37345765
MGI SNP Detail
Alliance Variant		 Chr6:113305260 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1317 bp distal
 SNP A/G A A A A A A G A A G
rs249380454
MGI SNP Detail
Alliance Variant		 Chr6:113305277 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1334 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221243395
MGI SNP Detail
Alliance Variant		 Chr6:113305296 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1353 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244933045
MGI SNP Detail
Alliance Variant		 Chr6:113305306 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1363 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30803056
MGI SNP Detail
Alliance Variant		 Chr6:113305359 Ogg1 Coding-Synonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 1416 bp distal
 SNP C/T C C C T
rs234159400
MGI SNP Detail
Alliance Variant		 Chr6:113305362 Ogg1 Coding-Synonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 1419 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250632500
MGI SNP Detail
Alliance Variant		 Chr6:113305395 Ogg1 Coding-NonSynonymous
Ogg1 Coding-Synonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 1452 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257093814
MGI SNP Detail
Alliance Variant		 Chr6:113305404 Ogg1 Coding-NonSynonymous
Ogg1 Coding-Synonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 1461 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224573507
MGI SNP Detail
Alliance Variant		 Chr6:113305431 Ogg1 Coding-NonSynonymous
Ogg1 Coding-Synonymous
Ogg1 mRNA-UTR
Ogg1 Noncoding-Transcript-Variant
Rr636490 1488 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30175089
MGI SNP Detail
Alliance Variant		 Chr6:113305471 Ogg1 Coding-NonSynonymous
Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1528 bp distal
 SNP A/G A A A G
rs30106817
MGI SNP Detail
Alliance Variant		 Chr6:113305515 Ogg1 Coding-Synonymous
Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1572 bp distal
 SNP A/G G G G A
rs252480519
MGI SNP Detail
Alliance Variant		 Chr6:113305648 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1705 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218935049
MGI SNP Detail
Alliance Variant		 Chr6:113305746 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1803 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239407528
MGI SNP Detail
Alliance Variant		 Chr6:113305765 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1822 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254033295
MGI SNP Detail
Alliance Variant		 Chr6:113305838 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1895 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs211996592
MGI SNP Detail
Alliance Variant		 Chr6:113305896 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1953 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232132055
MGI SNP Detail
Alliance Variant		 Chr6:113305927 Ogg1 Intron
Ogg1 Noncoding-Transcript-Variant
Rr636490 1984 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory