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Mouse SNP Summary
Symbol
Name
ID
Rr636536
regulatory region 636536
MGI:8098668

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255023493
MGI SNP Detail
Chr6:113470352 Rr636536 1966 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs263563532
MGI SNP Detail
Chr6:113470384 Rr636536 1934 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227350045
MGI SNP Detail
Chr6:113470395 Rr636536 1923 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs248776723
MGI SNP Detail
Chr6:113470547 Rr636536 1771 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216410465
MGI SNP Detail
Chr6:113470576 Rr636536 1742 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs230287906
MGI SNP Detail
Alliance Variant
Chr6:113470649 Prrt3 mRNA-UTR
Rr636536 1669 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs248971587
MGI SNP Detail
Alliance Variant
Chr6:113470723 Prrt3 mRNA-UTR
Rr636536 1595 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs214821589
MGI SNP Detail
Alliance Variant
Chr6:113470738 Prrt3 mRNA-UTR
Rr636536 1580 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs237289161
MGI SNP Detail
Alliance Variant
Chr6:113470744 Prrt3 mRNA-UTR
Rr636536 1574 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262178373
MGI SNP Detail
Alliance Variant
Chr6:113470760 Prrt3 mRNA-UTR
Rr636536 1558 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs216183223
MGI SNP Detail
Alliance Variant
Chr6:113470764 Prrt3 mRNA-UTR
Rr636536 1554 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs233218896
MGI SNP Detail
Alliance Variant
Chr6:113470767 Prrt3 mRNA-UTR
Rr636536 1551 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs253508189
MGI SNP Detail
Alliance Variant
Chr6:113470781 Prrt3 mRNA-UTR
Rr636536 1537 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs222022174
MGI SNP Detail
Alliance Variant
Chr6:113470822 Prrt3 mRNA-UTR
Rr636536 1496 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs245094652
MGI SNP Detail
Alliance Variant
Chr6:113470828 Prrt3 mRNA-UTR
Rr636536 1490 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs255662195
MGI SNP Detail
Alliance Variant
Chr6:113470895 Prrt3 mRNA-UTR
Rr636536 1423 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs223299526
MGI SNP Detail
Alliance Variant
Chr6:113470964 Prrt3 mRNA-UTR
Rr636536 1354 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243330504
MGI SNP Detail
Alliance Variant
Chr6:113470968 Prrt3 mRNA-UTR
Rr636536 1350 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs265693056
MGI SNP Detail
Alliance Variant
Chr6:113470974 Prrt3 mRNA-UTR
Rr636536 1344 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs227204870
MGI SNP Detail
Alliance Variant
Chr6:113471016 Prrt3 mRNA-UTR
Rr636536 1302 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs242770501
MGI SNP Detail
Alliance Variant
Chr6:113471248 Cpgi17847 within coordinates of
Prrt3 mRNA-UTR
Rr636536 1070 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260587566
MGI SNP Detail
Alliance Variant
Chr6:113471273 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 1045 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs224688638
MGI SNP Detail
Alliance Variant
Chr6:113471352 Cpgi17847 within coordinates of
Prrt3 Coding-NonSynonymous
Rr636536 966 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs251954946
MGI SNP Detail
Alliance Variant
Chr6:113471381 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 937 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214377124
MGI SNP Detail
Alliance Variant
Chr6:113471471 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 847 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229992696
MGI SNP Detail
Alliance Variant
Chr6:113471531 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 787 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252888080
MGI SNP Detail
Alliance Variant
Chr6:113471624 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 694 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A G A A A A
rs216219501
MGI SNP Detail
Alliance Variant
Chr6:113471627 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 691 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233070923
MGI SNP Detail
Alliance Variant
Chr6:113471672 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636535 within coordinates of
Rr636536 646 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253541481
MGI SNP Detail
Alliance Variant
Chr6:113471696 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 622 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216967142
MGI SNP Detail
Alliance Variant
Chr6:113471901 Cpgi17847 within coordinates of
Prrt3 Coding-NonSynonymous
Rr636536 417 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235517114
MGI SNP Detail
Alliance Variant
Chr6:113472256 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 62 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260983720
MGI SNP Detail
Alliance Variant
Chr6:113472269 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 49 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs223497209
MGI SNP Detail
Alliance Variant
Chr6:113472284 Cpgi17847 within coordinates of
Prrt3 Coding-Synonymous
Rr636536 34 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246198788
MGI SNP Detail
Alliance Variant
Chr6:113472602 Prrt3 Coding-Synonymous
Rr636536 263 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253757558
MGI SNP Detail
Alliance Variant
Chr6:113472686 Prrt3 Coding-Synonymous
Rr636536 347 bp distal
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220923887
MGI SNP Detail
Alliance Variant
Chr6:113473091 Prrt3 Intron
Rr636536 752 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242618061
MGI SNP Detail
Alliance Variant
Chr6:113473157 Prrt3 Intron
Rr636536 818 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260623840
MGI SNP Detail
Alliance Variant
Chr6:113473294 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 955 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224990640
MGI SNP Detail
Alliance Variant
Chr6:113473316 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 977 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241152380
MGI SNP Detail
Alliance Variant
Chr6:113473340 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1001 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265205459
MGI SNP Detail
Alliance Variant
Chr6:113473391 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1052 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs229427052
MGI SNP Detail
Alliance Variant
Chr6:113473449 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1110 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G A G G G A G G G G G G A G G G G G G G A G G G G
rs257985683
MGI SNP Detail
Alliance Variant
Chr6:113473451 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1112 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C T C C C T C C C C C C T C C C C C C C T C C C C
rs256943778
MGI SNP Detail
Alliance Variant
Chr6:113473459 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1120 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs227092563
MGI SNP Detail
Alliance Variant
Chr6:113473481 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1142 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579549367
MGI SNP Detail
Alliance Variant
Chr6:113473515 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1176 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247671012
MGI SNP Detail
Alliance Variant
Chr6:113473621 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1282 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs216909612
MGI SNP Detail
Alliance Variant
Chr6:113473644 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1305 bp distal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237573233
MGI SNP Detail
Alliance Variant
Chr6:113473651 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1312 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249442530
MGI SNP Detail
Alliance Variant
Chr6:113473653 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1314 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215277003
MGI SNP Detail
Alliance Variant
Chr6:113473654 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1315 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs236252571
MGI SNP Detail
Alliance Variant
Chr6:113473679 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1340 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253786849
MGI SNP Detail
Alliance Variant
Chr6:113473687 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1348 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221125993
MGI SNP Detail
Alliance Variant
Chr6:113473722 Prrt3 Intron
Prrt3 mRNA-UTR
Rr636536 1383 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236559898
MGI SNP Detail
Alliance Variant
Chr6:113473793 Prrt3 Coding-NonSynonymous
Prrt3 Intron
Rr636536 1454 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254318572
MGI SNP Detail
Alliance Variant
Chr6:113473897 Prrt3 Coding-Synonymous
Rr636536 1558 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221296912
MGI SNP Detail
Alliance Variant
Chr6:113473960 Prrt3 Coding-Synonymous
Rr636536 1621 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs244025312
MGI SNP Detail
Alliance Variant
Chr6:113473984 Prrt3 Coding-Synonymous
Rr636536 1645 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262749422
MGI SNP Detail
Alliance Variant
Chr6:113474111 Prrt3 Intron
Rr636536 1772 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A G A A A G A A A A A A G A A A A A A A G A A A A
rs221738816
MGI SNP Detail
Alliance Variant
Chr6:113474199 Prrt3 Intron
Rr636536 1860 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs239655763
MGI SNP Detail
Alliance Variant
Chr6:113474280 Prrt3 Coding-NonSynonymous
Rr636536 1941 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256978114
MGI SNP Detail
Alliance Variant
Chr6:113474327 Prrt3 Coding-Synonymous
Rr636536 1988 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 63 of 63

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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