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Mouse SNP Summary
Symbol
Name
ID 		Rr636939
regulatory region 636939
MGI:8099071

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228927431
MGI SNP Detail
Alliance Variant		 Chr6:115213653 Rr636939 1753 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G A G G G G G A A G G G G G G G A A G A G G G A A G G G G G A G G G G G A A G G A G G G G G A G G G
rs237306688
MGI SNP Detail
Alliance Variant		 Chr6:115213712 Rr636939 1694 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586344887
MGI SNP Detail
Alliance Variant		 Chr6:115213744 Rr636939 1662 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256108648
MGI SNP Detail
Alliance Variant		 Chr6:115213760 Rr636939 1646 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A G G A A A A A G A A A A A G G A A G A A A A A G A A A
rs226735770
MGI SNP Detail
Alliance Variant		 Chr6:115213873 Rr636939 1533 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31477092
MGI SNP Detail
Alliance Variant		 Chr6:115213886 Rr636939 1520 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/C C C A C C A C C A C A C
rs265917250
MGI SNP Detail
Alliance Variant		 Chr6:115214072 Rr636939 1334 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233872195
MGI SNP Detail
Alliance Variant		 Chr6:115214095 Rr636939 1311 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31477894
MGI SNP Detail
Alliance Variant		 Chr6:115214115 Rr636939 1291 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A G A A A
rs31477896
MGI SNP Detail
Alliance Variant		 Chr6:115214194 Rr636939 1212 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A G A A A A A A
rs212919886
MGI SNP Detail
Alliance Variant		 Chr6:115214427 Rr636939 979 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231938060
MGI SNP Detail
Alliance Variant		 Chr6:115214509 Rr636939 897 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245885465
MGI SNP Detail
Alliance Variant		 Chr6:115214548 Rr636939 858 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215405178
MGI SNP Detail
Alliance Variant		 Chr6:115214596 Rr636939 810 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs255669298
MGI SNP Detail
Alliance Variant		 Chr6:115214613 Rr636939 793 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G A
rs31477898
MGI SNP Detail
Alliance Variant		 Chr6:115214617 Rr636939 789 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G T G T
rs260518059
MGI SNP Detail
Alliance Variant		 Chr6:115214649 Rr636939 757 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G T G G G G G T T G G G G G G G T T G T G G G T T G G G G G T G G G G G T T G G T G G G G T T G G G
rs227592719
MGI SNP Detail
Alliance Variant		 Chr6:115214700 Rr636939 706 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235070419
MGI SNP Detail
Alliance Variant		 Chr6:115214776 Rr636939 630 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs387163381
MGI SNP Detail
Alliance Variant		 Chr6:115214862 Rr636939 544 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G A G G G G G G G A G G G A G A
rs213214503
MGI SNP Detail
Alliance Variant		 Chr6:115214875 Rr636939 531 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T C
rs260603108
MGI SNP Detail
Alliance Variant		 Chr6:115214876 Rr636939 530 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218384232
MGI SNP Detail
Alliance Variant		 Chr6:115214996 Rr636939 410 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256033831
MGI SNP Detail
Alliance Variant		 Chr6:115215159 Rr636939 247 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G/T C C C C G C C C C C G C C C C C C C C G C G C C C G G C C C C C C C C C C C G C C C G C C C C T G C C C
rs31477900
MGI SNP Detail
Alliance Variant		 Chr6:115215160 Rr636939 246 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A G G G A G G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs247840915
MGI SNP Detail
Alliance Variant		 Chr6:115215216 Rr636939 190 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/C A C
rs31477902
MGI SNP Detail
Alliance Variant		 Chr6:115215281 Rr636939 125 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T C T T C T T
rs263973884
MGI SNP Detail
Alliance Variant		 Chr6:115215319 Rr636939 87 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234916761
MGI SNP Detail
Alliance Variant		 Chr6:115215326 Rr636939 80 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31478724
MGI SNP Detail
Alliance Variant		 Chr6:115215339 Rr636939 67 bp proximal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G A G A G A G G A G G A
rs264868481
MGI SNP Detail
Alliance Variant		 Chr6:115215438 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31478726
MGI SNP Detail
Alliance Variant		 Chr6:115215449 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C T C C T C C
rs245829139
MGI SNP Detail
Alliance Variant		 Chr6:115215452 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215345781
MGI SNP Detail
Alliance Variant		 Chr6:115215520 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234985038
MGI SNP Detail
Alliance Variant		 Chr6:115215522 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/T A A A A T A A A A A T T A A A A A A A A T A T A A A T T A A A A A T A A A A A T T A A T A A A A T T A A A
rs259455847
MGI SNP Detail
Alliance Variant		 Chr6:115215572 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219647282
MGI SNP Detail
Alliance Variant		 Chr6:115215574 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236659369
MGI SNP Detail
Alliance Variant		 Chr6:115215630 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31478728
MGI SNP Detail
Alliance Variant		 Chr6:115215635 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G A G G G G G G G
rs31478730
MGI SNP Detail
Alliance Variant		 Chr6:115216027 Rr636939 within coordinates of
Syn2 Intron
Syn2 mRNA-UTR
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C T C T C C T C C T
rs387790827
MGI SNP Detail
Alliance Variant		 Chr6:115216092 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G
rs231129505
MGI SNP Detail
Alliance Variant		 Chr6:115216103 Rr636939 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A G A A A A A G G A A A A A A A A G A G A A A G G A A A A A A A A A A A G A A A G A A A A A G A A A
rs250199214
MGI SNP Detail
Alliance Variant		 Chr6:115216143 Rr636939 29 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220538244
MGI SNP Detail
Alliance Variant		 Chr6:115216144 Rr636939 30 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246114968
MGI SNP Detail
Alliance Variant		 Chr6:115216238 Rr636939 124 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A A G G A A A A A G A A A A A G G A A G A A A A G G A A A
rs265883713
MGI SNP Detail
Alliance Variant		 Chr6:115216252 Rr636939 138 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T C T T T T T C C T T T T T T T C C T C T T T C C T T T T T C T T T T T C C T T C T T T T T C T T T
rs226565370
MGI SNP Detail
Alliance Variant		 Chr6:115216256 Rr636939 142 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C T C C C C C T T C C C C C C C T T C T C C C T T C C C C C T C C C C C T T C C T C C C C T T C C C
rs31478732
MGI SNP Detail
Alliance Variant		 Chr6:115216261 Rr636939 147 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T C T T C C T T T
rs259174822
MGI SNP Detail
Alliance Variant		 Chr6:115216486 Rr636939 372 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C T
rs31479514
MGI SNP Detail
Alliance Variant		 Chr6:115216520 Rr636939 406 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C T T C T T T C T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243964826
MGI SNP Detail
Alliance Variant		 Chr6:115216602 Rr636939 488 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A G
rs239764466
MGI SNP Detail
Alliance Variant		 Chr6:115216608 Rr636939 494 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T C T T T T T C C T T T T T T T C C T T T T T C C T T T T T C T T T T T C T T T C T T T T T C T T T
rs31479516
MGI SNP Detail
Alliance Variant		 Chr6:115216612 Rr636939 498 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A G A A A A A
rs228176558
MGI SNP Detail
Alliance Variant		 Chr6:115216626 Rr636939 512 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254098226
MGI SNP Detail
Alliance Variant		 Chr6:115216644 Rr636939 530 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219393305
MGI SNP Detail
Alliance Variant		 Chr6:115216722 Rr636939 608 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/C C C C C A C C C C C A A C C C C C C C A A C A C C C A A C C C C C A C C C C C A A C C A C C C C A A C C C
rs228001900
MGI SNP Detail
Alliance Variant		 Chr6:115216724 Rr636939 610 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G C C C C G C C C C C G G C C C C C C C G G C G C C C G G C C C C C G C C C C C G G C C G C C C C G G C C C
rs254607712
MGI SNP Detail
Alliance Variant		 Chr6:115216766 Rr636939 652 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31479518
MGI SNP Detail
Alliance Variant		 Chr6:115216767 Rr636939 653 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A G G A G G G A G G A G
rs31479520
MGI SNP Detail
Alliance Variant		 Chr6:115216823 Rr636939 709 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/T T T T T A T T T A T T A T
rs31479522
MGI SNP Detail
Alliance Variant		 Chr6:115216853 Rr636939 739 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C T C C C C C C T C
rs31480474
MGI SNP Detail
Alliance Variant		 Chr6:115216953 Rr636939 839 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A G A A G G A A G G A G
rs240649770
MGI SNP Detail
Alliance Variant		 Chr6:115217078 Rr636939 964 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A G A A A A A G G A A A A A A A G G A G A A G G G A A A A A G A A A A A G G A A G A A G A A G A A A
rs31480476
MGI SNP Detail
Alliance Variant		 Chr6:115217112 Rr636939 998 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G A G
rs226921187
MGI SNP Detail
Alliance Variant		 Chr6:115217141 Rr636939 1027 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C T C C C C C T T C C C C C C C C T C C C C C T T C C C C C C C C C C C T C C C T C C C C C T C C C
rs241007580
MGI SNP Detail
Alliance Variant		 Chr6:115217167 Rr636939 1053 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583119494
MGI SNP Detail
Alliance Variant		 Chr6:115217235 Rr636939 1121 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A A A
rs31480478
MGI SNP Detail
Alliance Variant		 Chr6:115217248 Rr636939 1134 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C T C C T C T C T
rs250329790
MGI SNP Detail
Alliance Variant		 Chr6:115217297 Rr636939 1183 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G A G G G G G A A G G G G G G G G A G G G G G A A G G G G G G G G G G G A G G G A G G G G G A G G G
rs31480480
MGI SNP Detail
Alliance Variant		 Chr6:115217343 Rr636939 1229 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A G A G A A G A A
rs239713688
MGI SNP Detail
Alliance Variant		 Chr6:115217378 Rr636939 1264 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259121927
MGI SNP Detail
Alliance Variant		 Chr6:115217421 Rr636939 1307 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G A G A G G G G
rs232462343
MGI SNP Detail
Alliance Variant		 Chr6:115217434 Rr636939 1320 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/T T T T T A T T T T T A A T T T T T T T T A T A T T T A A T T T T T T T T T T T A A T T A T T T T A A A T A
rs250314178
MGI SNP Detail
Alliance Variant		 Chr6:115217460 Rr636939 1346 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G/T G G G G A G G G G G A A G G G G G G G T A G A G G G A A G G G G G A G G G G G A A G G A G G G G G A G G G
rs264509374
MGI SNP Detail
Alliance Variant		 Chr6:115217464 Rr636939 1350 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31480482
MGI SNP Detail
Alliance Variant		 Chr6:115217468 Rr636939 1354 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C C T C C C
rs250148695
MGI SNP Detail
Alliance Variant		 Chr6:115217494 Rr636939 1380 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T C C C C T C C C C C T T C C C C C C C C T C T C C C T T C C C C C C C C C C C T T C C T C C C C C T C C C
rs213926123
MGI SNP Detail
Alliance Variant		 Chr6:115217742 Rr636939 1628 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs31473164
MGI SNP Detail
Alliance Variant		 Chr6:115217743 Rr636939 1629 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G G T G G G G G G
rs387190370
MGI SNP Detail
Alliance Variant		 Chr6:115217755 Rr636939 1641 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C C C
rs245606515
MGI SNP Detail
Alliance Variant		 Chr6:115217756 Rr636939 1642 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214833352
MGI SNP Detail
Alliance Variant		 Chr6:115217769 Rr636939 1655 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs31473166
MGI SNP Detail
Alliance Variant		 Chr6:115217849 Rr636939 1735 bp distal
Rr636940 within coordinates of
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G C C C G C C C C C C C G C
rs263641673
MGI SNP Detail
Alliance Variant		 Chr6:115217969 Rr636939 1855 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218838275
MGI SNP Detail
Alliance Variant		 Chr6:115218015 Rr636939 1901 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP C/G C C C C G C C C C C G G C C C C C C C G G C G C C G G G C C C C C G C C C C C G G C C G C C G C G G C C C
rs31473168
MGI SNP Detail
Alliance Variant		 Chr6:115218099 Rr636939 1985 bp distal
Syn2 Intron
Syn2 Noncoding-Transcript-Variant
 SNP A/G A A A A G G A G G G A A G A
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Showing SNP(s) 1 - 86 of 86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory