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Mouse SNP Summary
Symbol
Name
ID 		Rr637086
regulatory region 637086
MGI:8099218

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256902773
MGI SNP Detail
Alliance Variant		 Chr6:115853780 Ift122 Intron
Rr637086 1949 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216245420
MGI SNP Detail
Alliance Variant		 Chr6:115853781 Ift122 Intron
Rr637086 1948 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234090284
MGI SNP Detail
Alliance Variant		 Chr6:115853787 Ift122 Intron
Rr637086 1942 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs252992704
MGI SNP Detail
Alliance Variant		 Chr6:115853789 Ift122 Intron
Rr637086 1940 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211957373
MGI SNP Detail
Alliance Variant		 Chr6:115853796 Ift122 Intron
Rr637086 1933 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31505007
MGI SNP Detail
Alliance Variant		 Chr6:115853797 Ift122 Intron
Rr637086 1932 bp proximal
 SNP A/G A A G A A G G A A A G G A G G A A
rs256939845
MGI SNP Detail
Alliance Variant		 Chr6:115853798 Ift122 Intron
Rr637086 1931 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223169254
MGI SNP Detail
Alliance Variant		 Chr6:115853830 Ift122 Intron
Rr637086 1899 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245187555
MGI SNP Detail
Alliance Variant		 Chr6:115853841 Ift122 Intron
Rr637086 1888 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31505009
MGI SNP Detail
Alliance Variant		 Chr6:115853862 Ift122 Intron
Rr637086 1867 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs225782077
MGI SNP Detail
Alliance Variant		 Chr6:115853916 Ift122 Intron
Rr637086 1813 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242954029
MGI SNP Detail
Alliance Variant		 Chr6:115853926 Ift122 Intron
Rr637086 1803 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256156188
MGI SNP Detail
Alliance Variant		 Chr6:115853928 Ift122 Intron
Rr637086 1801 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225125667
MGI SNP Detail
Alliance Variant		 Chr6:115853988 Ift122 Intron
Rr637086 1741 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239229178
MGI SNP Detail
Alliance Variant		 Chr6:115854001 Ift122 Intron
Rr637086 1728 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262909416
MGI SNP Detail
Alliance Variant		 Chr6:115854088 Ift122 Intron
Rr637086 1641 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31505011
MGI SNP Detail
Alliance Variant		 Chr6:115854099 Ift122 Intron
Rr637086 1630 bp proximal
 SNP C/G C C G C C G G C C C G C C G C
rs216809006
MGI SNP Detail
Alliance Variant		 Chr6:115854185 Ift122 Intron
Rr637086 1544 bp proximal
 SNP C/T C C C C T C C C C C T C C C C C C C C T C T C C C T T C C C C C T C C T C T T T C C T C C C C T T C C C
rs227967741
MGI SNP Detail
Alliance Variant		 Chr6:115854257 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1472 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs586726622
MGI SNP Detail
Alliance Variant		 Chr6:115854348 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1381 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247116914
MGI SNP Detail
Alliance Variant		 Chr6:115854365 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1364 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31505013
MGI SNP Detail
Alliance Variant		 Chr6:115854424 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1305 bp proximal
 SNP A/C C C C C C C C C A C C C C C
rs230509979
MGI SNP Detail
Alliance Variant		 Chr6:115854442 Ift122 Coding-Synonymous
Ift122 mRNA-UTR
Ift122 Noncoding-Transcript-Variant
Rr637086 1287 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261965787
MGI SNP Detail
Alliance Variant		 Chr6:115854528 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1201 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584498379
MGI SNP Detail
Alliance Variant		 Chr6:115854618 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1111 bp proximal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214573041
MGI SNP Detail
Alliance Variant		 Chr6:115854619 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1110 bp proximal
 SNP C/T C C C C T C C C C C T C C C C C C C T T C T C C C T T C C C C C T C C T C T T T C C T C C C C T T C C C
rs239939875
MGI SNP Detail
Alliance Variant		 Chr6:115854624 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1105 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs259412221
MGI SNP Detail
Alliance Variant		 Chr6:115854625 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1104 bp proximal
 SNP A/C C C C C A C C C C C A C C C C C C C C A C C C C C A A C C C C C A C C C C C A C C C A C C C C C A C C C
rs222764787
MGI SNP Detail
Alliance Variant		 Chr6:115854626 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1103 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236495918
MGI SNP Detail
Alliance Variant		 Chr6:115854634 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1095 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs578429013
MGI SNP Detail
Alliance Variant		 Chr6:115854642 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1087 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs582070568
MGI SNP Detail
Alliance Variant		 Chr6:115854659 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1070 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T T T T T T T T T T
rs249661505
MGI SNP Detail
Alliance Variant		 Chr6:115854660 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1069 bp proximal
 SNP A/G A A A A G A A A A A G A A A A A A A G G A G A A A G G A A A A A G A A A G A A G A A A A G A A A
rs584333568
MGI SNP Detail
Alliance Variant		 Chr6:115854671 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1058 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G T G G G G G G G G G
rs219062707
MGI SNP Detail
Alliance Variant		 Chr6:115854692 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1037 bp proximal
 SNP A/G G G G G A G G G G G A G G G G G G G A A G A G G G G G G G G G G G G G A A G G A G G G G A G G G
rs239036072
MGI SNP Detail
Alliance Variant		 Chr6:115854719 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1010 bp proximal
 SNP C/T C C C C T C C C C C T C C C C C C C T T C C C C T T C C C C C T C C C C C T T C C T C C C C T T C C
rs582800495
MGI SNP Detail
Alliance Variant		 Chr6:115854737 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 992 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265363822
MGI SNP Detail
Alliance Variant		 Chr6:115854749 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 980 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs240704093
MGI SNP Detail
Alliance Variant		 Chr6:115854772 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 957 bp proximal
 SNP A/C C A
rs30270136
MGI SNP Detail
Alliance Variant		 Chr6:115854773 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 956 bp proximal
 SNP A/C A A C
rs249635042
MGI SNP Detail
Alliance Variant		 Chr6:115854810 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 919 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31505805
MGI SNP Detail
Alliance Variant		 Chr6:115854834 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 895 bp proximal
 SNP C/T C C C C C C C C C C C C T C C
rs229545432
MGI SNP Detail
Alliance Variant		 Chr6:115854900 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 829 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs247174235
MGI SNP Detail
Alliance Variant		 Chr6:115854919 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 810 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253600835
MGI SNP Detail
Alliance Variant		 Chr6:115855011 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 718 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31505807
MGI SNP Detail
Alliance Variant		 Chr6:115855015 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 714 bp proximal
 SNP A/G G G G G G G G G G G G G G A G
rs31505809
MGI SNP Detail
Alliance Variant		 Chr6:115855059 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 670 bp proximal
 SNP A/G G G G G G G A G G G G G G G G
rs250429583
MGI SNP Detail
Alliance Variant		 Chr6:115855107 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 622 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215012749
MGI SNP Detail
Alliance Variant		 Chr6:115855145 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 584 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237714904
MGI SNP Detail
Alliance Variant		 Chr6:115855261 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 468 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258068040
MGI SNP Detail
Alliance Variant		 Chr6:115855295 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 434 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216689120
MGI SNP Detail
Alliance Variant		 Chr6:115855315 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 414 bp proximal
 SNP C/T C C C C T C C C C C T T C C C C C C C C T C C C C C T T C C C C C T C C C C C T C C C T C C C C C T C C C
rs236350423
MGI SNP Detail
Alliance Variant		 Chr6:115855321 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 408 bp proximal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs249696916
MGI SNP Detail
Alliance Variant		 Chr6:115855339 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 390 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218890434
MGI SNP Detail
Alliance Variant		 Chr6:115855492 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 237 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238330171
MGI SNP Detail
Alliance Variant		 Chr6:115855544 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 185 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582542344
MGI SNP Detail
Alliance Variant		 Chr6:115855558 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 171 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31505811
MGI SNP Detail
Alliance Variant		 Chr6:115855562 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 167 bp proximal
 SNP C/T C C C C C C C T C T T C
rs224396417
MGI SNP Detail
Alliance Variant		 Chr6:115855563 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 166 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs246773372
MGI SNP Detail
Alliance Variant		 Chr6:115855567 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 162 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31505813
MGI SNP Detail
Alliance Variant		 Chr6:115855570 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 159 bp proximal
 SNP C/T C C T C C T T C C C T C T C
rs223126231
MGI SNP Detail
Alliance Variant		 Chr6:115855574 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 155 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31506635
MGI SNP Detail
Alliance Variant		 Chr6:115855638 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 91 bp proximal
 SNP C/T C C C C C C C C C C C C C T C
rs253611984
MGI SNP Detail
Alliance Variant		 Chr6:115855668 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 61 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223947720
MGI SNP Detail
Alliance Variant		 Chr6:115855682 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 47 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254978622
MGI SNP Detail
Alliance Variant		 Chr6:115855726 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 3 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs31506637
MGI SNP Detail
Alliance Variant		 Chr6:115855809 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 within coordinates of
 SNP C/T T T C C C T C C T T C C C T C C C
rs31506639
MGI SNP Detail
Alliance Variant		 Chr6:115855837 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 within coordinates of
 SNP A/G A A G A A G G A A A G A A G A
rs31506641
MGI SNP Detail
Alliance Variant		 Chr6:115855969 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 within coordinates of
 SNP C/G G G G G G G G G C G G G G G G
rs578841163
MGI SNP Detail
Alliance Variant		 Chr6:115856044 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 52 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31507515
MGI SNP Detail
Alliance Variant		 Chr6:115856093 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 101 bp distal
 SNP C/G G G G G G G G G G G G G C G G
rs243477747
MGI SNP Detail
Alliance Variant		 Chr6:115856106 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 114 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31507517
MGI SNP Detail
Alliance Variant		 Chr6:115856206 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 214 bp distal
 SNP C/T T T C T T C C T T T C T T T T
rs236314537
MGI SNP Detail
Alliance Variant		 Chr6:115856272 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 280 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs262479785
MGI SNP Detail
Alliance Variant		 Chr6:115856348 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 356 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215985772
MGI SNP Detail
Alliance Variant		 Chr6:115856351 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 359 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31507519
MGI SNP Detail
Alliance Variant		 Chr6:115856353 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 361 bp distal
 SNP A/G G G A G G A G G G G A G G A G
rs252822616
MGI SNP Detail
Alliance Variant		 Chr6:115856487 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 495 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222927543
MGI SNP Detail
Alliance Variant		 Chr6:115856489 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 497 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585908612
MGI SNP Detail
Alliance Variant		 Chr6:115856523 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 531 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31507521
MGI SNP Detail
Alliance Variant		 Chr6:115856588 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 596 bp distal
 SNP G/T G G T G G T G G G G T G G G G
rs249241479
MGI SNP Detail
Alliance Variant		 Chr6:115856683 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 691 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222605602
MGI SNP Detail
Alliance Variant		 Chr6:115856708 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 716 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242777635
MGI SNP Detail
Alliance Variant		 Chr6:115856763 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 771 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579939818
MGI SNP Detail
Alliance Variant		 Chr6:115856789 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 797 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583228351
MGI SNP Detail
Alliance Variant		 Chr6:115856797 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 805 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585107085
MGI SNP Detail
Alliance Variant		 Chr6:115856799 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 807 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265196707
MGI SNP Detail
Alliance Variant		 Chr6:115856805 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 813 bp distal
 SNP C/T T T T T C T T T T T C T T T T T T T T C T C T T T C C T T T T T C T T T T T C C T T C T T T T C C T T T
rs231458154
MGI SNP Detail
Alliance Variant		 Chr6:115856833 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 841 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248585268
MGI SNP Detail
Alliance Variant		 Chr6:115856847 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 855 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30361470
MGI SNP Detail
Alliance Variant		 Chr6:115856852 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 860 bp distal
 SNP C/T T T C T C T T T T C C T T T T T C C
rs229085764
MGI SNP Detail
Alliance Variant		 Chr6:115856864 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 872 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30127945
MGI SNP Detail
Alliance Variant		 Chr6:115856865 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 873 bp distal
 SNP C/T T T C C C T C C T T C C T T C C
rs31508405
MGI SNP Detail
Alliance Variant		 Chr6:115856893 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 901 bp distal
 SNP A/G A A G G G A G A A A G G A G A G
rs580468770
MGI SNP Detail
Alliance Variant		 Chr6:115856959 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 967 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31508407
MGI SNP Detail
Alliance Variant		 Chr6:115856981 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 989 bp distal
 SNP C/T T T C T T C T T T T C T T C T
rs251632640
MGI SNP Detail
Alliance Variant		 Chr6:115857112 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1120 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242609937
MGI SNP Detail
Alliance Variant		 Chr6:115857224 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1232 bp distal
 SNP A/T T A
rs216206042
MGI SNP Detail
Alliance Variant		 Chr6:115857311 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1319 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs238843239
MGI SNP Detail
Alliance Variant		 Chr6:115857320 Ift122 Intron
Ift122 Noncoding-Transcript-Variant
Rr637086 1328 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 111
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory