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Mouse SNP Summary
Symbol
Name
ID 		Rr637290
regulatory region 637290
MGI:8099422

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226529947
MGI SNP Detail
Alliance Variant		 Chr6:117149157 Cxcl12 Intron
Rr637290 1855 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G T G T G G G G G T G T G G G G T G T G T G G G G G G G G
rs579314740
MGI SNP Detail
Alliance Variant		 Chr6:117149172 Cxcl12 Intron
Rr637290 1840 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A G A
rs246385314
MGI SNP Detail
Alliance Variant		 Chr6:117149261 Cxcl12 Intron
Rr637290 1751 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215799249
MGI SNP Detail
Alliance Variant		 Chr6:117149264 Cxcl12 Intron
Rr637290 1748 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs46808506
MGI SNP Detail
Alliance Variant		 Chr6:117149273 Cxcl12 Intron
Rr637290 1739 bp proximal
 SNP A/T T T T T T T A T A T A T T A T
rs234206585
MGI SNP Detail
Alliance Variant		 Chr6:117149310 Cxcl12 Intron
Rr637290 1702 bp proximal
 SNP G G G
rs260394113
MGI SNP Detail
Alliance Variant		 Chr6:117149322 Cxcl12 Intron
Rr637290 1690 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50309616
MGI SNP Detail
Alliance Variant		 Chr6:117149411 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1601 bp proximal
 SNP G/T G G G G G G T G T G T G G T G
rs48354985
MGI SNP Detail
Alliance Variant		 Chr6:117149526 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1486 bp proximal
 SNP A/G G G G G G G A G A G A G G A G
rs45808639
MGI SNP Detail
Alliance Variant		 Chr6:117149577 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1435 bp proximal
 SNP A/G G G G G G G A G A G A G G A G
rs214820313
MGI SNP Detail
Alliance Variant		 Chr6:117149579 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1433 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A G A
rs49462096
MGI SNP Detail
Alliance Variant		 Chr6:117149600 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1412 bp proximal
 SNP G/T G G G G G G T G G T G G T G
rs252243373
MGI SNP Detail
Alliance Variant		 Chr6:117149624 Cxcl12 Intron
Rr637288 within coordinates of
Rr637290 1388 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C T C C C C C T C T C C C C T C T C T C C C T C T C T
rs222207340
MGI SNP Detail
Alliance Variant		 Chr6:117149638 Cxcl12 Intron
Rr637290 1374 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240561235
MGI SNP Detail
Alliance Variant		 Chr6:117149648 Cxcl12 Intron
Rr637290 1364 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C T C C C C C T C T C C C C T C T C T C C C C C C C C
rs264109047
MGI SNP Detail
Alliance Variant		 Chr6:117149656 Cxcl12 Intron
Rr637290 1356 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C T C C C C C T C T C C C C T C T C T C C C T C T C T
rs220073547
MGI SNP Detail
Alliance Variant		 Chr6:117149672 Cxcl12 Intron
Rr637290 1340 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G T G T G G G G G T G T G G G G T G T G T G G G T G T G T
rs244693815
MGI SNP Detail
Alliance Variant		 Chr6:117149692 Cxcl12 Intron
Rr637290 1320 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257220449
MGI SNP Detail
Alliance Variant		 Chr6:117149703 Cxcl12 Intron
Rr637290 1309 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G T G T G G G G G T G T G G G G T G T G T G G G T G T G T
rs47452154
MGI SNP Detail
Alliance Variant		 Chr6:117149778 Cxcl12 Intron
Rr637290 1234 bp proximal
 SNP A/G G G G G G G A G A G A A G G A A G
rs240503208
MGI SNP Detail
Alliance Variant		 Chr6:117149883 Cxcl12 Intron
Rr637290 1129 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G A G A G G G G A G A G A G G G G G A G A
rs259867006
MGI SNP Detail
Alliance Variant		 Chr6:117149884 Cxcl12 Intron
Rr637290 1128 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C T C C C C C T C T C C C C T C T C T C C C C C T C
rs233963915
MGI SNP Detail
Alliance Variant		 Chr6:117149919 Cxcl12 Intron
Rr637290 1093 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C A C A C C C C C A C A C C C C A C A C A C C C C C A C A
rs254571602
MGI SNP Detail
Alliance Variant		 Chr6:117149925 Cxcl12 Intron
Rr637290 1087 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G A G A G G G G A G A G A G G G G G A G A
rs264710223
MGI SNP Detail
Alliance Variant		 Chr6:117149968 Cxcl12 Intron
Rr637290 1044 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs8262671
MGI SNP Detail
Alliance Variant		 Chr6:117150036 Cxcl12 Intron
Rr637290 976 bp proximal
 SNP C/T C C C T
rs243960466
MGI SNP Detail
Alliance Variant		 Chr6:117150067 Cxcl12 Intron
Rr637290 945 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G A G G G G G G G G A G G G G G G G G
rs8262670
MGI SNP Detail
Alliance Variant		 Chr6:117150098 Cxcl12 Intron
Rr637290 914 bp proximal
 SNP A/C C C C C C C A
rs49642516
MGI SNP Detail
Alliance Variant		 Chr6:117150193 Cxcl12 Intron
Rr637290 819 bp proximal
 SNP A/G A A A A A A G A G A G A A G A
rs8262669
MGI SNP Detail
Alliance Variant		 Chr6:117150232 Cxcl12 Intron
Rr637290 780 bp proximal
 SNP C/T C C C C C C C T
rs8262668
MGI SNP Detail
Alliance Variant		 Chr6:117150270 Cxcl12 Intron
Rr637290 742 bp proximal
 SNP A/G G G G G G G G A
rs224218427
MGI SNP Detail
Alliance Variant		 Chr6:117150315 Cxcl12 Intron
Rr637290 697 bp proximal
 SNP C C C
rs8262667
MGI SNP Detail
Alliance Variant		 Chr6:117150331 Cxcl12 Intron
Rr637290 681 bp proximal
 SNP C/T T T T T T T T C
rs8262665
MGI SNP Detail
Alliance Variant		 Chr6:117150338 Cxcl12 Intron
Rr637290 674 bp proximal
 SNP C/T C C C C C C C C T C T C T C C C C C T C
rs8262666
MGI SNP Detail
Alliance Variant		 Chr6:117150359 Cxcl12 Intron
Rr637290 653 bp proximal
 SNP G/T G G G G G G G T
rs50438050
MGI SNP Detail
Alliance Variant		 Chr6:117150385 Cxcl12 Intron
Rr637290 627 bp proximal
 SNP C/T T T T T T T C T C T C T T C T
rs8262664
MGI SNP Detail
Alliance Variant		 Chr6:117150417 Cxcl12 Intron
Rr637290 595 bp proximal
 SNP A/G A A A A G A A
rs219990823
MGI SNP Detail
Alliance Variant		 Chr6:117150457 Cxcl12 Coding-Synonymous
Rr637290 555 bp proximal
Tssr58395 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs8236551
MGI SNP Detail
Alliance Variant		 Chr6:117150653 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 359 bp proximal
Tssr58402 within coordinates of
 SNP A/G G G G G G G G G G G G G G G A
rs8236552
MGI SNP Detail
Alliance Variant		 Chr6:117150688 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 324 bp proximal
Tssr58404 within coordinates of
Tssr62621 within coordinates of
 SNP C/T T T T T T T T T T T T T T T C
rs8245876
MGI SNP Detail
Alliance Variant		 Chr6:117150748 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 264 bp proximal
Tssr58405 within coordinates of
 SNP C/G C C C C C C C C C C C G C G C G C C C C G G C
rs8245877
MGI SNP Detail
Alliance Variant		 Chr6:117150838 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 174 bp proximal
 SNP C/T C C C C C C C C C C C C T
rs261414159
MGI SNP Detail
Alliance Variant		 Chr6:117150848 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 164 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229031645
MGI SNP Detail
Alliance Variant		 Chr6:117150882 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 130 bp proximal
Tssr58409 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs8238257
MGI SNP Detail
Alliance Variant		 Chr6:117150885 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 127 bp proximal
Tssr58409 within coordinates of
 SNP C/T C C C C C C C C C C T
rs4226231
MGI SNP Detail
Alliance Variant		 Chr6:117151005 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 7 bp proximal
Tssr58415 within coordinates of
 SNP A/C C C C C C C C C C C C C C A
rs244208252
MGI SNP Detail
Alliance Variant		 Chr6:117151091 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 58 bp distal
 SNP T T T
rs4226230
MGI SNP Detail
Alliance Variant		 Chr6:117151165 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 132 bp distal
Tssr58420 within coordinates of
 SNP A/G G G G G G G G A
rs4226229
MGI SNP Detail
Alliance Variant		 Chr6:117151173 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 140 bp distal
Tssr58421 within coordinates of
 SNP G/T G G G G G G G T
rs4226228
MGI SNP Detail
Alliance Variant		 Chr6:117151187 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 154 bp distal
Tssr58421 within coordinates of
 SNP A/G G G G G G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs4226227
MGI SNP Detail
Alliance Variant		 Chr6:117151209 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 176 bp distal
Tssr58423 within coordinates of
 SNP A/C A A A A A A A A A A A A A A C
rs4226226
MGI SNP Detail
Alliance Variant		 Chr6:117151211 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637289 within coordinates of
Rr637290 178 bp distal
Tssr58423 within coordinates of
 SNP A/G G G G G G G G G G G G A G A G A G G G G G A G G
rs8262679
MGI SNP Detail
Alliance Variant		 Chr6:117151512 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 479 bp distal
 SNP C/T C C C C C C C C C C C T
rs51002915
MGI SNP Detail
Alliance Variant		 Chr6:117151531 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 498 bp distal
Tssr62625 within coordinates of
 SNP G/T T T T T T T T G T G T G
rs251027893
MGI SNP Detail
Alliance Variant		 Chr6:117151552 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 519 bp distal
Tssr62625 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs8236553
MGI SNP Detail
Alliance Variant		 Chr6:117151579 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 546 bp distal
 SNP G/T G G G G G G G G G G G G G G T
rs8245887
MGI SNP Detail
Alliance Variant		 Chr6:117151729 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 696 bp distal
 SNP C/T C C C C C C C C C C C C T
rs253298973
MGI SNP Detail
Alliance Variant		 Chr6:117151802 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 769 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs8236374
MGI SNP Detail
Alliance Variant		 Chr6:117151821 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 788 bp distal
 SNP A/C A A A A A A A C A A A A C
rs8236375
MGI SNP Detail
Alliance Variant		 Chr6:117151833 Cxcl12 Intron
Cxcl12 mRNA-UTR
Rr637290 800 bp distal
 SNP A/C C C C C C C C A C C C C C
rs47454075
MGI SNP Detail
Alliance Variant		 Chr6:117152131 Cxcl12 Intron
Rr637290 1098 bp distal
Tssr58434 within coordinates of
 SNP A/C A A A A A A C A C A C A A C A
rs45793323
MGI SNP Detail
Alliance Variant		 Chr6:117152147 Cxcl12 Intron
Rr637290 1114 bp distal
Tssr58434 within coordinates of
 SNP C/T T T T T T T C T C T C T T C T
rs237396586
MGI SNP Detail
Alliance Variant		 Chr6:117152259 Cxcl12 Intron
Rr637290 1226 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256546803
MGI SNP Detail
Alliance Variant		 Chr6:117152577 Cxcl12 Intron
Rr637290 1544 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C T C T C C C C C T C T C C C C T C T C T C C C T C C
rs226984538
MGI SNP Detail
Alliance Variant		 Chr6:117152579 Cxcl12 Intron
Rr637290 1546 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C G C G C C C C C G C G C C C C G C G C G C C C G C C C
rs240144229
MGI SNP Detail
Alliance Variant		 Chr6:117152580 Cxcl12 Intron
Rr637290 1547 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T G T G T T T T T G T G T T T T G T G T G T T T G T T T
rs264062637
MGI SNP Detail
Alliance Variant		 Chr6:117152669 Cxcl12 Intron
Rr637290 1636 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235021073
MGI SNP Detail
Alliance Variant		 Chr6:117152741 Cxcl12 Intron
Rr637290 1708 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249488190
MGI SNP Detail
Alliance Variant		 Chr6:117152818 Cxcl12 Intron
Rr637290 1785 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213670477
MGI SNP Detail
Alliance Variant		 Chr6:117152871 Cxcl12 Intron
Rr637290 1838 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G A G A G G G G A G A G A G G G G G G G G
rs226084868
MGI SNP Detail
Alliance Variant		 Chr6:117152875 Cxcl12 Intron
Rr637290 1842 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T A T A T T T T T A T A T T T T A T A T A T T T A T A T A
rs262031575
MGI SNP Detail
Alliance Variant		 Chr6:117152922 Cxcl12 Intron
Rr637290 1889 bp distal
 SNP T T T
rs50992513
MGI SNP Detail
Alliance Variant		 Chr6:117152942 Cxcl12 Intron
Rr637290 1909 bp distal
 SNP C/T C C C C C C T C T C T C C T C
rs45688189
MGI SNP Detail		 Chr6:117152969 Cxcl12 within coordinates of
Rr637290 1936 bp distal
 SNP A/G A A A A A A A A A G A A A
rs214219895
MGI SNP Detail
Alliance Variant		 Chr6:117152971 Cxcl12 Intron
Rr637290 1938 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G A G A G G G G A G A G A G G G A G A G A
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Showing SNP(s) 1 - 75 of 75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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