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Mouse SNP Summary
Symbol
Name
ID 		Rr637495
regulatory region 637495
MGI:8099627

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228147396
MGI SNP Detail
Alliance Variant		 Chr6:118577269 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1996 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31582767
MGI SNP Detail
Alliance Variant		 Chr6:118577293 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1972 bp proximal
 SNP C/T T T T T T T T T C C C C T T C C T
rs216678312
MGI SNP Detail
Alliance Variant		 Chr6:118577295 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1970 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264089411
MGI SNP Detail
Alliance Variant		 Chr6:118577317 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1948 bp proximal
 SNP C/T C T
rs252453108
MGI SNP Detail
Alliance Variant		 Chr6:118577373 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1892 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212581053
MGI SNP Detail
Alliance Variant		 Chr6:118577400 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1865 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C
rs237818841
MGI SNP Detail
Alliance Variant		 Chr6:118577476 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1789 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31582769
MGI SNP Detail
Alliance Variant		 Chr6:118577511 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1754 bp proximal
 SNP C/T C C C C C C T C T C T C C T C
rs214850018
MGI SNP Detail
Alliance Variant		 Chr6:118577527 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1738 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233284523
MGI SNP Detail
Alliance Variant		 Chr6:118577562 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1703 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31582771
MGI SNP Detail
Alliance Variant		 Chr6:118577612 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1653 bp proximal
 SNP C/T C C C C C C T C C C C C C C T
rs31582773
MGI SNP Detail
Alliance Variant		 Chr6:118577641 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1624 bp proximal
 SNP C/T T T T T T T C T T T T T T T T
rs31583535
MGI SNP Detail
Alliance Variant		 Chr6:118577755 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1510 bp proximal
 SNP G/T G G G G G G T G T G T G G T G
rs261729829
MGI SNP Detail
Alliance Variant		 Chr6:118577824 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1441 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222849299
MGI SNP Detail
Alliance Variant		 Chr6:118577938 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1327 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31583537
MGI SNP Detail
Alliance Variant		 Chr6:118577998 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1267 bp proximal
 SNP A/C C C C C C C A C A C A A C C A C A
rs259300085
MGI SNP Detail
Alliance Variant		 Chr6:118578077 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1188 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31583539
MGI SNP Detail
Alliance Variant		 Chr6:118578129 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1136 bp proximal
 SNP C/T C C C C C C T C C C C C C C C
rs31583541
MGI SNP Detail
Alliance Variant		 Chr6:118578168 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1097 bp proximal
 SNP G/T T T T T T T T T T T T T T T G
rs31579324
MGI SNP Detail
Alliance Variant		 Chr6:118578223 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Cacna1c Splice-Site
Gm38887 within coordinates of
Rr637495 1042 bp proximal
 SNP C/T C C C C C C C C C T T C C C T T
rs234994426
MGI SNP Detail
Alliance Variant		 Chr6:118578264 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1001 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249030807
MGI SNP Detail
Alliance Variant		 Chr6:118578409 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 856 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213048382
MGI SNP Detail
Alliance Variant		 Chr6:118578460 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 805 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229794171
MGI SNP Detail
Alliance Variant		 Chr6:118578467 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 798 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G C C G G C G C G G G G G G G C C G G G C G C G C G G G C G G C G
rs244322018
MGI SNP Detail
Alliance Variant		 Chr6:118578471 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 794 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214982621
MGI SNP Detail
Alliance Variant		 Chr6:118578489 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 776 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs584311863
MGI SNP Detail
Alliance Variant		 Chr6:118578491 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 774 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578579201
MGI SNP Detail
Alliance Variant		 Chr6:118578494 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 771 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581135265
MGI SNP Detail
Alliance Variant		 Chr6:118578496 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 769 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584785332
MGI SNP Detail
Alliance Variant		 Chr6:118578503 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 762 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233274398
MGI SNP Detail
Alliance Variant		 Chr6:118578508 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 757 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs215664349
MGI SNP Detail
Alliance Variant		 Chr6:118578526 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 739 bp proximal
 SNP A A A
rs219726076
MGI SNP Detail
Alliance Variant		 Chr6:118578532 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 733 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C
rs236761316
MGI SNP Detail
Alliance Variant		 Chr6:118578537 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 728 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256690603
MGI SNP Detail
Alliance Variant		 Chr6:118578611 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 654 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs226181656
MGI SNP Detail
Alliance Variant		 Chr6:118578623 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 642 bp proximal
 SNP A/C A C
rs244600008
MGI SNP Detail
Alliance Variant		 Chr6:118578663 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 602 bp proximal
 SNP A A A
rs212592859
MGI SNP Detail
Alliance Variant		 Chr6:118578669 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 596 bp proximal
 SNP A A A
rs253018239
MGI SNP Detail
Alliance Variant		 Chr6:118578701 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 564 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A C A C A A A A A A A C C A A A C A C A C A A A A A A A A
rs222091875
MGI SNP Detail
Alliance Variant		 Chr6:118578704 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 561 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T C T C T T T T T T T C C T T T C T C T C T T T T T T T T
rs31579326
MGI SNP Detail
Alliance Variant		 Chr6:118578713 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 552 bp proximal
 SNP C/T T T T T T C T C T T T T C T
rs31579328
MGI SNP Detail
Alliance Variant		 Chr6:118578749 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 516 bp proximal
 SNP C/T T T T T T T T T T T T T T C T
rs220526084
MGI SNP Detail
Alliance Variant		 Chr6:118578776 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 489 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A G A G A A A A A A A G G A A A G A G A G A A A A A A A A
rs243936648
MGI SNP Detail
Alliance Variant		 Chr6:118578811 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 454 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs31579330
MGI SNP Detail
Alliance Variant		 Chr6:118578819 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 446 bp proximal
 SNP C/T T T T T T T C T C T C T T C T
rs229659084
MGI SNP Detail
Alliance Variant		 Chr6:118578846 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 419 bp proximal
 SNP C/T T C
rs31579332
MGI SNP Detail
Alliance Variant		 Chr6:118578922 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 343 bp proximal
 SNP A/G A A A A A A A A G A A G A
rs244490574
MGI SNP Detail
Alliance Variant		 Chr6:118578980 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 285 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256966409
MGI SNP Detail
Alliance Variant		 Chr6:118578986 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 279 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264095457
MGI SNP Detail
Alliance Variant		 Chr6:118579062 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 203 bp proximal
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246390249
MGI SNP Detail
Alliance Variant		 Chr6:118579085 Cacna1c Coding-NonSynonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 180 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218656977
MGI SNP Detail
Alliance Variant		 Chr6:118579227 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 38 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31579954
MGI SNP Detail
Alliance Variant		 Chr6:118579228 Cacna1c Coding-NonSynonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 37 bp proximal
 SNP G/T G G G G G G G G G T G G G G G T G
rs31579956
MGI SNP Detail
Alliance Variant		 Chr6:118579275 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 within coordinates of
 SNP A/G G G G G G G G G A G A G G G A G A
rs254620255
MGI SNP Detail
Alliance Variant		 Chr6:118579281 Cacna1c Coding-Synonymous
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs387759829
MGI SNP Detail
Alliance Variant		 Chr6:118579439 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 153 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C
rs31579958
MGI SNP Detail
Alliance Variant		 Chr6:118579478 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 192 bp distal
 SNP C/T T T T T T T C T C T C C T T C T C
rs233198547
MGI SNP Detail
Alliance Variant		 Chr6:118579549 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 263 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253157897
MGI SNP Detail
Alliance Variant		 Chr6:118579556 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 270 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222033782
MGI SNP Detail
Alliance Variant		 Chr6:118579582 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 296 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31579960
MGI SNP Detail
Alliance Variant		 Chr6:118579599 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 313 bp distal
 SNP G/T G G G G G G T G G G T G G G
rs31579962
MGI SNP Detail
Alliance Variant		 Chr6:118579603 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 317 bp distal
 SNP A/G G G G G G G G G G G A G G G G A
rs31580704
MGI SNP Detail
Alliance Variant		 Chr6:118579641 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 355 bp distal
 SNP C/T C C C C C C T C C C T C C C C
rs242279796
MGI SNP Detail
Alliance Variant		 Chr6:118579694 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 408 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264852150
MGI SNP Detail
Alliance Variant		 Chr6:118579700 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 414 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31580706
MGI SNP Detail
Alliance Variant		 Chr6:118579714 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 428 bp distal
 SNP C/T T T T T T C T C C C T T C C
rs248890666
MGI SNP Detail
Alliance Variant		 Chr6:118579721 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 435 bp distal
 SNP C/T T C
rs582619601
MGI SNP Detail
Alliance Variant		 Chr6:118579732 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 446 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238238517
MGI SNP Detail
Alliance Variant		 Chr6:118579801 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 515 bp distal
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257121983
MGI SNP Detail
Alliance Variant		 Chr6:118579832 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 546 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs227465419
MGI SNP Detail
Alliance Variant		 Chr6:118579843 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 557 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs31580708
MGI SNP Detail
Alliance Variant		 Chr6:118579851 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 565 bp distal
 SNP C/T C C C C C C C T C C C T C
rs264318466
MGI SNP Detail
Alliance Variant		 Chr6:118579870 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 584 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs227723090
MGI SNP Detail
Alliance Variant		 Chr6:118579882 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 596 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
rs249616093
MGI SNP Detail
Alliance Variant		 Chr6:118579956 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 670 bp distal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214614430
MGI SNP Detail
Alliance Variant		 Chr6:118579958 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 672 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233378446
MGI SNP Detail
Alliance Variant		 Chr6:118579971 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 685 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31580710
MGI SNP Detail
Alliance Variant		 Chr6:118580008 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 722 bp distal
 SNP C/T T T T T T C T C C C C T T C C
rs216146142
MGI SNP Detail
Alliance Variant		 Chr6:118580029 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 743 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G G G A A G G G G G G G A G G G A G G G G
rs235823128
MGI SNP Detail
Alliance Variant		 Chr6:118580065 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 779 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31580712
MGI SNP Detail
Alliance Variant		 Chr6:118580072 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 786 bp distal
 SNP A/G G G G G G G A G G G G G G G
rs248364673
MGI SNP Detail
Alliance Variant		 Chr6:118580094 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 808 bp distal
 SNP C/T T C
rs265977156
MGI SNP Detail
Alliance Variant		 Chr6:118580191 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 905 bp distal
 SNP C/T C T
rs232518741
MGI SNP Detail
Alliance Variant		 Chr6:118580231 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 945 bp distal
 SNP G/T T G
rs31581564
MGI SNP Detail
Alliance Variant		 Chr6:118580250 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 964 bp distal
 SNP C/T C C C C C C C C C T C C C C C T T
rs219341693
MGI SNP Detail
Alliance Variant		 Chr6:118580251 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 965 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238316797
MGI SNP Detail
Alliance Variant		 Chr6:118580258 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 972 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31581566
MGI SNP Detail
Alliance Variant		 Chr6:118580304 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1018 bp distal
 SNP A/G A A A A A A A A A G A A A A A G A
rs226048950
MGI SNP Detail
Alliance Variant		 Chr6:118580366 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1080 bp distal
 SNP A/C C A
rs244652399
MGI SNP Detail
Alliance Variant		 Chr6:118580396 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1110 bp distal
 SNP G/T T G
rs247357900
MGI SNP Detail
Alliance Variant		 Chr6:118580400 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1114 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266077350
MGI SNP Detail
Alliance Variant		 Chr6:118580410 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1124 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212401044
MGI SNP Detail
Alliance Variant		 Chr6:118580429 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1143 bp distal
 SNP A/G A G
rs31581568
MGI SNP Detail
Alliance Variant		 Chr6:118580504 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1218 bp distal
 SNP A/G G G G G G G G G G A G G G G G A G
rs254351624
MGI SNP Detail
Alliance Variant		 Chr6:118580585 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1299 bp distal
 SNP C/T T C
rs31581570
MGI SNP Detail
Alliance Variant		 Chr6:118580645 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1359 bp distal
 SNP A/G A A A A A A G A G G G A A G G G
rs238485615
MGI SNP Detail
Alliance Variant		 Chr6:118580663 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1377 bp distal
 SNP A/C C A
rs262759724
MGI SNP Detail
Alliance Variant		 Chr6:118580702 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1416 bp distal
 SNP G/T G T
rs216294364
MGI SNP Detail
Alliance Variant		 Chr6:118580703 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1417 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214323114
MGI SNP Detail
Alliance Variant		 Chr6:118580746 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Gm38887 within coordinates of
Rr637495 1460 bp distal
 SNP C/T T C
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Showing SNP(s) 1 - 100 of 113
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory