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Mouse SNP Summary
Symbol
Name
ID
Rr637501
regulatory region 637501
MGI:8099633

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224017591
MGI SNP Detail
Alliance Variant
Chr6:118621566 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1954 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243946783
MGI SNP Detail
Alliance Variant
Chr6:118621589 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1931 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T C C T T C T C T T T T T T T C C T T T C T C T C T T T C T T T T
rs213831950
MGI SNP Detail
Alliance Variant
Chr6:118621590 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1930 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G A G A G G G G G G G A A G G G A G A G A G G G G G G G G
rs31582308
MGI SNP Detail
Alliance Variant
Chr6:118621605 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1915 bp proximal
SNP G/T G G G G G G G G T G G G G T G
rs31582310
MGI SNP Detail
Alliance Variant
Chr6:118621708 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1812 bp proximal
SNP A/G G G G G G G A G G G A G G G G
rs30267264
MGI SNP Detail
Alliance Variant
Chr6:118621736 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1784 bp proximal
SNP A/G G G A G A A A A G G G G G G G A G A G
rs234600941
MGI SNP Detail
Alliance Variant
Chr6:118621791 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1729 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs29926968
MGI SNP Detail
Alliance Variant
Chr6:118621828 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1692 bp proximal
SNP A/G A A G G A A G
rs218090465
MGI SNP Detail
Alliance Variant
Chr6:118621830 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1690 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31582313
MGI SNP Detail
Alliance Variant
Chr6:118621906 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637500 within coordinates of
Rr637501 1614 bp proximal
SNP C/T C C C C C C T C C C C C C C
rs257139089
MGI SNP Detail
Alliance Variant
Chr6:118621907 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637500 within coordinates of
Rr637501 1613 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223257859
MGI SNP Detail
Alliance Variant
Chr6:118622020 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637500 within coordinates of
Rr637501 1500 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244094328
MGI SNP Detail
Alliance Variant
Chr6:118622041 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637500 within coordinates of
Rr637501 1479 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31583485
MGI SNP Detail
Alliance Variant
Chr6:118622058 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637500 within coordinates of
Rr637501 1462 bp proximal
SNP C/T C C C C C C C C T C C C C T C
rs31583487
MGI SNP Detail
Alliance Variant
Chr6:118622098 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1422 bp proximal
SNP A/G A A A A A A A A G A A A G A
rs31583489
MGI SNP Detail
Alliance Variant
Chr6:118622190 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1330 bp proximal
SNP G/T T T T T T T T T G T T T T G T
rs261191288
MGI SNP Detail
Alliance Variant
Chr6:118622200 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1320 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs223975755
MGI SNP Detail
Alliance Variant
Chr6:118622300 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1220 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31583491
MGI SNP Detail
Alliance Variant
Chr6:118622323 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1197 bp proximal
SNP A/T T T T T T T T T A T T T T A T
rs262192048
MGI SNP Detail
Alliance Variant
Chr6:118622335 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1185 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230831500
MGI SNP Detail
Alliance Variant
Chr6:118622389 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1131 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251968217
MGI SNP Detail
Alliance Variant
Chr6:118622399 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1121 bp proximal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs216237092
MGI SNP Detail
Alliance Variant
Chr6:118622419 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1101 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30890497
MGI SNP Detail
Alliance Variant
Chr6:118622428 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1092 bp proximal
SNP A/C A A C C A A C
rs31583493
MGI SNP Detail
Alliance Variant
Chr6:118622578 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 942 bp proximal
SNP A/T T T T T T T T T A T T T T A T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212394124
MGI SNP Detail
Alliance Variant
Chr6:118622606 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 914 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230859445
MGI SNP Detail
Alliance Variant
Chr6:118622655 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 865 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs262128485
MGI SNP Detail
Alliance Variant
Chr6:118622706 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 814 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223494631
MGI SNP Detail
Alliance Variant
Chr6:118622717 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 803 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs30992102
MGI SNP Detail
Alliance Variant
Chr6:118622733 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 787 bp proximal
SNP G/T T T G T G G G G G T G T T G T G G G G
rs31584146
MGI SNP Detail
Alliance Variant
Chr6:118622758 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 762 bp proximal
SNP C/G C C C C C C G C C C G C C C C
rs31584148
MGI SNP Detail
Alliance Variant
Chr6:118622812 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 708 bp proximal
SNP A/G G G G G G G G G A G G G G A G
rs31584150
MGI SNP Detail
Alliance Variant
Chr6:118622840 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 680 bp proximal
SNP A/G G G G G G G A G G G A G G G G
rs261159128
MGI SNP Detail
Alliance Variant
Chr6:118622854 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 666 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs218069792
MGI SNP Detail
Alliance Variant
Chr6:118622855 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 665 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs241926962
MGI SNP Detail
Alliance Variant
Chr6:118622876 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 644 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265001866
MGI SNP Detail
Alliance Variant
Chr6:118622897 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 623 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230695921
MGI SNP Detail
Alliance Variant
Chr6:118622905 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 615 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256804332
MGI SNP Detail
Alliance Variant
Chr6:118622926 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 594 bp proximal
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A C A A A A A A A C A A A A A A C A C A A A A A A A A A A
rs257768939
MGI SNP Detail
Alliance Variant
Chr6:118622931 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 589 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228827057
MGI SNP Detail
Alliance Variant
Chr6:118622933 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 587 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T C T T T T T T T C T T T T T T C T C T T T T T C T T T T
rs30115591
MGI SNP Detail
Alliance Variant
Chr6:118622987 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 533 bp proximal
SNP A/C C C A C A A A A C C C C C C C A C A C
rs212359657
MGI SNP Detail
Alliance Variant
Chr6:118623000 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 520 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31584153
MGI SNP Detail
Alliance Variant
Chr6:118623034 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 486 bp proximal
SNP G/T T T T T T T G T G T G T T G T
rs250987605
MGI SNP Detail
Alliance Variant
Chr6:118623055 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 465 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs215299872
MGI SNP Detail
Alliance Variant
Chr6:118623073 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 447 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G C G G G G G G G C G G G G G G C G C G G G G G C G G G G
rs31585155
MGI SNP Detail
Alliance Variant
Chr6:118623115 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 405 bp proximal
SNP A/G G G A A A G A G A A A
rs31585157
MGI SNP Detail
Alliance Variant
Chr6:118623153 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 367 bp proximal
SNP C/T C C C C C C T C T C T C C T C
rs216782216
MGI SNP Detail
Alliance Variant
Chr6:118623327 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 193 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31585159
MGI SNP Detail
Alliance Variant
Chr6:118623363 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 157 bp proximal
SNP C/T C C C C C C T C T C T C C T C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31585161
MGI SNP Detail
Alliance Variant
Chr6:118623414 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 106 bp proximal
SNP C/T T C C C T C T C C C
rs218029929
MGI SNP Detail
Alliance Variant
Chr6:118623548 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs244823809
MGI SNP Detail
Alliance Variant
Chr6:118623599 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256984133
MGI SNP Detail
Alliance Variant
Chr6:118623623 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222828203
MGI SNP Detail
Alliance Variant
Chr6:118623640 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30656456
MGI SNP Detail
Alliance Variant
Chr6:118623650 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP C/T T T C T C C C C C T C T T C T C C C C
rs31586204
MGI SNP Detail
Alliance Variant
Chr6:118623799 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
Rr637502 within coordinates of
SNP C/T C C C C C C C C T C C C T C
rs228044532
MGI SNP Detail
Alliance Variant
Chr6:118623923 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A G A A A A A A A G A A A A A A G A G A A A A A G A A A A
rs31586206
MGI SNP Detail
Alliance Variant
Chr6:118623989 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP C/T T T T T T T C T C T C T C T
rs30752977
MGI SNP Detail
Alliance Variant
Chr6:118623995 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 within coordinates of
SNP C/T C C T C T T T T T C T C C T C T T T C
rs31586209
MGI SNP Detail
Alliance Variant
Chr6:118624137 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 105 bp distal
SNP A/G A A A A G A G G A G
rs255572070
MGI SNP Detail
Alliance Variant
Chr6:118624190 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 158 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs31586211
MGI SNP Detail
Alliance Variant
Chr6:118624217 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 185 bp distal
SNP A/G A A A A A A G A A G A A A A
rs30258836
MGI SNP Detail
Alliance Variant
Chr6:118624246 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 214 bp distal
SNP A/G A G G A A G
rs247440480
MGI SNP Detail
Alliance Variant
Chr6:118624272 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 240 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216750540
MGI SNP Detail
Alliance Variant
Chr6:118624324 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 292 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236502372
MGI SNP Detail
Alliance Variant
Chr6:118624363 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 331 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249691001
MGI SNP Detail
Alliance Variant
Chr6:118624365 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 333 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T C T T T T T T T C T T T T T T C T C T T T T T T T T T T
rs212161832
MGI SNP Detail
Alliance Variant
Chr6:118624370 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 338 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C G C C C C C C C G C C C C C C G C G C C C C C C C C C C
rs31586213
MGI SNP Detail
Alliance Variant
Chr6:118624404 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 372 bp distal
SNP A/G G G G G G G A G A G A G G A G
rs261936228
MGI SNP Detail
Alliance Variant
Chr6:118624421 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 389 bp distal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223279473
MGI SNP Detail
Alliance Variant
Chr6:118624422 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 390 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31587225
MGI SNP Detail
Alliance Variant
Chr6:118624431 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 399 bp distal
SNP A/T A A A A A T A T A A A A
rs251791390
MGI SNP Detail
Alliance Variant
Chr6:118624446 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 414 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31587227
MGI SNP Detail
Alliance Variant
Chr6:118624447 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 415 bp distal
SNP A/G A A A A A A G A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241212780
MGI SNP Detail
Alliance Variant
Chr6:118624497 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 465 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253632936
MGI SNP Detail
Alliance Variant
Chr6:118624546 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 514 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs229645710
MGI SNP Detail
Alliance Variant
Chr6:118624553 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 521 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31587229
MGI SNP Detail
Alliance Variant
Chr6:118624582 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 550 bp distal
SNP C/T C C C C C C T C T C C C T C
rs265356039
MGI SNP Detail
Alliance Variant
Chr6:118624641 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 609 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A G A A A A A A A G A A A A A A G A G A A A A A G A A A A
rs231946978
MGI SNP Detail
Alliance Variant
Chr6:118624647 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 615 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C T C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs31587231
MGI SNP Detail
Alliance Variant
Chr6:118624664 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 632 bp distal
SNP G/T G G G G G G T G T G G G G
rs260742104
MGI SNP Detail
Alliance Variant
Chr6:118624687 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 655 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229403026
MGI SNP Detail
Alliance Variant
Chr6:118624736 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 704 bp distal
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243564707
MGI SNP Detail
Alliance Variant
Chr6:118624746 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 714 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31587233
MGI SNP Detail
Alliance Variant
Chr6:118624785 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 753 bp distal
SNP A/G G G G G G G G G A G G G G A G
rs237213625
MGI SNP Detail
Alliance Variant
Chr6:118624881 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 849 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31588075
MGI SNP Detail
Alliance Variant
Chr6:118624885 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 853 bp distal
SNP C/T C C C C C C T C T C T C C T C
rs31588077
MGI SNP Detail
Alliance Variant
Chr6:118624938 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 906 bp distal
SNP C/T C C C C C C C C C C C C C T
rs31588079
MGI SNP Detail
Alliance Variant
Chr6:118624939 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 907 bp distal
SNP A/G G G G G G G A G G G A G G G
rs251852980
MGI SNP Detail
Alliance Variant
Chr6:118624950 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 918 bp distal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221796813
MGI SNP Detail
Alliance Variant
Chr6:118624973 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 941 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G A G G G G G G G A G G G G G G A G A G G G G G G G G G G
rs234971503
MGI SNP Detail
Alliance Variant
Chr6:118624977 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 945 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C T C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs260609134
MGI SNP Detail
Alliance Variant
Chr6:118625000 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 968 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221094548
MGI SNP Detail
Alliance Variant
Chr6:118625006 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 974 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C T C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs246389717
MGI SNP Detail
Alliance Variant
Chr6:118625013 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 981 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C T C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs31588081
MGI SNP Detail
Alliance Variant
Chr6:118625183 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1151 bp distal
SNP C/T C C C C C C T C T C T C C T C
rs30172263
MGI SNP Detail
Alliance Variant
Chr6:118625236 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1204 bp distal
SNP C/T C C T C T T T C C C C C C C T C T C
rs224669021
MGI SNP Detail
Alliance Variant
Chr6:118625260 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1228 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G A G A G G G G G G G G G G
rs31588774
MGI SNP Detail
Alliance Variant
Chr6:118625285 Cacna1c Intron
Cacna1c Noncoding-Transcript-Variant
Rr637501 1253 bp distal
SNP A/G A A A A A A A G A G A A G A
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Showing SNP(s) 1 - 100 of 120

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory