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Mouse SNP Summary
Symbol
Name
ID
Rr637632
regulatory region 637632
MGI:8099764

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Showing SNP(s) 1 - 100 of 116

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262726537
MGI SNP Detail
Alliance Variant
Chr6:119303394 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1992 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232054696
MGI SNP Detail
Alliance Variant
Chr6:119303398 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1988 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs253124595
MGI SNP Detail
Alliance Variant
Chr6:119303505 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1881 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583892416
MGI SNP Detail
Alliance Variant
Chr6:119303550 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1836 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C T C C C C C C C
rs265930394
MGI SNP Detail
Alliance Variant
Chr6:119303577 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1809 bp proximal
SNP A/G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G A G G G G G G G G
rs228583254
MGI SNP Detail
Alliance Variant
Chr6:119303630 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1756 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248896083
MGI SNP Detail
Alliance Variant
Chr6:119303658 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1728 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212196277
MGI SNP Detail
Alliance Variant
Chr6:119303844 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1542 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G A G G G G G G A G G G A G G G G G G G G
rs230893578
MGI SNP Detail
Alliance Variant
Chr6:119303866 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1520 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245231124
MGI SNP Detail
Alliance Variant
Chr6:119303879 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1507 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215057321
MGI SNP Detail
Alliance Variant
Chr6:119303914 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1472 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs240348698
MGI SNP Detail
Alliance Variant
Chr6:119303931 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1455 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs31664344
MGI SNP Detail
Alliance Variant
Chr6:119303961 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1425 bp proximal
SNP C/G C C C C C C C C G C C G C
rs226692638
MGI SNP Detail
Alliance Variant
Chr6:119303982 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1404 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234807381
MGI SNP Detail
Alliance Variant
Chr6:119303992 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1394 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31664346
MGI SNP Detail
Alliance Variant
Chr6:119304000 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1386 bp proximal
SNP G/T T T T T G G G G
rs264097472
MGI SNP Detail
Alliance Variant
Chr6:119304025 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1361 bp proximal
SNP C/T T C
rs31664348
MGI SNP Detail
Alliance Variant
Chr6:119304059 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1327 bp proximal
SNP A/G A A A A A A A A A A G A
rs237298688
MGI SNP Detail
Alliance Variant
Chr6:119304077 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1309 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31664350
MGI SNP Detail
Alliance Variant
Chr6:119304091 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1295 bp proximal
SNP C/T C C C C C C C C C T C
rs224074389
MGI SNP Detail
Alliance Variant
Chr6:119304093 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1293 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248831777
MGI SNP Detail
Alliance Variant
Chr6:119304115 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1271 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31664352
MGI SNP Detail
Alliance Variant
Chr6:119304146 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1240 bp proximal
SNP A/G A A A A A A A A A G A A G A
rs225507406
MGI SNP Detail
Alliance Variant
Chr6:119304154 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1232 bp proximal
SNP A/G G A
rs229208521
MGI SNP Detail
Alliance Variant
Chr6:119304158 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1228 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242808131
MGI SNP Detail
Alliance Variant
Chr6:119304230 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1156 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C G C C C C C C G C C C G C C C C C C C C
rs256117306
MGI SNP Detail
Alliance Variant
Chr6:119304234 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1152 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C T C C C C C C C C
rs225080277
MGI SNP Detail
Alliance Variant
Chr6:119304258 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1128 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs241178584
MGI SNP Detail
Alliance Variant
Chr6:119304278 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1108 bp proximal
SNP C C C
rs215423597
MGI SNP Detail
Alliance Variant
Chr6:119304293 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1093 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231893360
MGI SNP Detail
Alliance Variant
Chr6:119304294 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1092 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258615810
MGI SNP Detail
Alliance Variant
Chr6:119304368 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1018 bp proximal
SNP C/G C C C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C G C C C C C C G C C C G C C C C C C C C
rs216967282
MGI SNP Detail
Alliance Variant
Chr6:119304382 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1004 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A A A A G A A A A A A G A A A G A A A A A A A A
rs235525850
MGI SNP Detail
Alliance Variant
Chr6:119304394 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 992 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T G G T T T T G T T T T T G T T T T T T G T T T G T T T G T T T T
rs247843604
MGI SNP Detail
Alliance Variant
Chr6:119304419 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 967 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258999050
MGI SNP Detail
Alliance Variant
Chr6:119304429 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 957 bp proximal
SNP G G G
rs231172041
MGI SNP Detail
Alliance Variant
Chr6:119304488 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 898 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A A A A G A A A A A A G A A A G A A A G A A A A
rs257633238
MGI SNP Detail
Alliance Variant
Chr6:119304489 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 897 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C T C C C T C C C C
rs31665214
MGI SNP Detail
Alliance Variant
Chr6:119304490 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 896 bp proximal
SNP C/G G G G G G G G G G C G G G
rs31665216
MGI SNP Detail
Alliance Variant
Chr6:119304491 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 895 bp proximal
SNP C/T T T T T T T C T T T T T T
rs246179026
MGI SNP Detail
Alliance Variant
Chr6:119304667 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 719 bp proximal
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263696177
MGI SNP Detail
Alliance Variant
Chr6:119304673 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 713 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223416782
MGI SNP Detail
Alliance Variant
Chr6:119304675 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 711 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237155527
MGI SNP Detail
Alliance Variant
Chr6:119304839 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 547 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C T C T T C C C C T C C C C C T C C C C C C T C C C T C C C C C C C C
rs256783758
MGI SNP Detail
Alliance Variant
Chr6:119304899 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 487 bp proximal
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225040947
MGI SNP Detail
Alliance Variant
Chr6:119304916 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 470 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246089398
MGI SNP Detail
Alliance Variant
Chr6:119304927 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 459 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587475321
MGI SNP Detail
Alliance Variant
Chr6:119304956 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 430 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262840497
MGI SNP Detail
Alliance Variant
Chr6:119305021 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 365 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232350260
MGI SNP Detail
Alliance Variant
Chr6:119305025 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 361 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253396881
MGI SNP Detail
Alliance Variant
Chr6:119305029 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 357 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs216932818
MGI SNP Detail
Alliance Variant
Chr6:119305092 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 294 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229504742
MGI SNP Detail
Alliance Variant
Chr6:119305108 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 278 bp proximal
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581519256
MGI SNP Detail
Alliance Variant
Chr6:119305150 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 236 bp proximal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242646018
MGI SNP Detail
Alliance Variant
Chr6:119305231 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 155 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213300261
MGI SNP Detail
Alliance Variant
Chr6:119305316 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 70 bp proximal
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31665218
MGI SNP Detail
Alliance Variant
Chr6:119305340 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 46 bp proximal
SNP A/G A A A G A G G
rs262269855
MGI SNP Detail
Alliance Variant
Chr6:119305348 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 38 bp proximal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215382987
MGI SNP Detail
Alliance Variant
Chr6:119305370 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 16 bp proximal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240743204
MGI SNP Detail
Alliance Variant
Chr6:119305373 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 13 bp proximal
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260074718
MGI SNP Detail
Alliance Variant
Chr6:119305416 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G T T G G G G T G G G G G T G G G G G G T G G G T G G G G G G G G
rs223339297
MGI SNP Detail
Alliance Variant
Chr6:119305423 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G A G G G G G G A G G G A G G G G G G G G
rs229838903
MGI SNP Detail
Alliance Variant
Chr6:119305493 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C T C C C C C C C C
rs250401002
MGI SNP Detail
Alliance Variant
Chr6:119305579 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226422101
MGI SNP Detail
Alliance Variant
Chr6:119305636 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/G A G
rs238881159
MGI SNP Detail
Alliance Variant
Chr6:119305637 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/G A G
rs265312489
MGI SNP Detail
Alliance Variant
Chr6:119305739 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G A A G G G G A G G G G G A G G G G G G A G G G A G G G A G G G G
rs224344604
MGI SNP Detail
Alliance Variant
Chr6:119305747 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A C A C C A A A A C A A A A A C A A A A A A C A A A C A A A C A A A A
rs261929581
MGI SNP Detail
Alliance Variant
Chr6:119305924 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP C C C
rs259255105
MGI SNP Detail
Alliance Variant
Chr6:119305931 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229467228
MGI SNP Detail
Alliance Variant
Chr6:119305948 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228289084
MGI SNP Detail
Alliance Variant
Chr6:119305986 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP T T T
rs242586769
MGI SNP Detail
Alliance Variant
Chr6:119306067 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Lrtm2 Splice-Site
Rr637632 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G G G A G G G A G G G G G G G G
rs31665220
MGI SNP Detail
Alliance Variant
Chr6:119306136 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 within coordinates of
SNP C/T C C C T C T T
rs586306654
MGI SNP Detail
Alliance Variant
Chr6:119306190 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 36 bp distal
Rr637633 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230695315
MGI SNP Detail
Alliance Variant
Chr6:119306202 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 48 bp distal
Rr637633 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs251143979
MGI SNP Detail
Alliance Variant
Chr6:119306283 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 129 bp distal
Rr637633 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A A A T T T T T T T T T T T T T T
rs215749880
MGI SNP Detail
Alliance Variant
Chr6:119306367 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 213 bp distal
Rr637633 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A A G G G G G G G G G G G G G G
rs238387523
MGI SNP Detail
Alliance Variant
Chr6:119306368 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 214 bp distal
Rr637633 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T T C C C C C C C C C C C C C C
rs247785211
MGI SNP Detail
Alliance Variant
Chr6:119306370 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 216 bp distal
Rr637633 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217239400
MGI SNP Detail
Alliance Variant
Chr6:119306552 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 398 bp distal
Rr637633 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254747340
MGI SNP Detail
Alliance Variant
Chr6:119306595 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 441 bp distal
Rr637633 within coordinates of
SNP C C C
rs250306407
MGI SNP Detail
Alliance Variant
Chr6:119306791 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 637 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218348846
MGI SNP Detail
Alliance Variant
Chr6:119306806 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 652 bp distal
SNP C C C
rs232572173
MGI SNP Detail
Alliance Variant
Chr6:119306822 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 668 bp distal
SNP A A A
rs258653579
MGI SNP Detail
Alliance Variant
Chr6:119306964 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 810 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224263664
MGI SNP Detail
Alliance Variant
Chr6:119307014 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 860 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs246568093
MGI SNP Detail
Alliance Variant
Chr6:119307029 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 875 bp distal
SNP G/T G G G G G G G G G G G G G G G G G G T G T T G G G G T G G G G G T G G G G G G T G G G T G G G G G G G G
rs259154515
MGI SNP Detail
Alliance Variant
Chr6:119307030 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 876 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222878127
MGI SNP Detail
Alliance Variant
Chr6:119307071 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 917 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G G G A G G G A G G G A G G G G
rs236122613
MGI SNP Detail
Alliance Variant
Chr6:119307259 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1105 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A G A A A G A A A A
rs245410407
MGI SNP Detail
Alliance Variant
Chr6:119307351 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1197 bp distal
SNP A/G G A
rs254885012
MGI SNP Detail
Alliance Variant
Chr6:119307352 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1198 bp distal
SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G G G A G G G A G G G G G G G G
rs230389501
MGI SNP Detail
Alliance Variant
Chr6:119307376 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1222 bp distal
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256697700
MGI SNP Detail
Alliance Variant
Chr6:119307432 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1278 bp distal
SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T T C T T T T T T C T T T C T T T C T T T T
rs31665222
MGI SNP Detail
Alliance Variant
Chr6:119307466 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1312 bp distal
SNP C/T C C C C C T T
rs31666144
MGI SNP Detail
Alliance Variant
Chr6:119307505 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1351 bp distal
SNP C/T C C C C C T T
rs247704131
MGI SNP Detail
Alliance Variant
Chr6:119307514 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1360 bp distal
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217152541
MGI SNP Detail
Alliance Variant
Chr6:119307671 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1517 bp distal
Tssr62706 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A A A C A A A A A C A A A A A A C A A A C A A A C A A A A
rs229759546
MGI SNP Detail
Alliance Variant
Chr6:119307674 Cacna2d4 Intron
Cacna2d4 Noncoding-Transcript-Variant
Cpgi17908 within coordinates of
Lrtm2 Intron
Lrtm2 mRNA-UTR
Lrtm2 Noncoding-Transcript-Variant
Rr637632 1520 bp distal
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 100 of 116

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory