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Mouse SNP Summary
Symbol
Name
ID 		Rr641040
regulatory region 641040
MGI:8103172

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Showing SNP(s) 1 - 40 of 40

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs30853448
MGI SNP Detail		 Chr6:144990853 Bcat1 within coordinates of
Rr641039 within coordinates of
Rr641040 1920 bp proximal
 SNP G/T T T T G T T G G G G T G G G T T T T T
rs30800247
MGI SNP Detail		 Chr6:144991173 Bcat1 within coordinates of
Rr641039 within coordinates of
Rr641040 1600 bp proximal
 SNP A/G A A G G
rs32237295
MGI SNP Detail		 Chr6:144991290 Bcat1 within coordinates of
Rr641039 within coordinates of
Rr641040 1483 bp proximal
 SNP C/G G G G G G G G G G G G G G C G
rs32237297
MGI SNP Detail		 Chr6:144991324 Bcat1 within coordinates of
Rr641039 within coordinates of
Rr641040 1449 bp proximal
 SNP A/G G G G G G G G G A G G G G G A A G
rs32237299
MGI SNP Detail		 Chr6:144991567 Bcat1 within coordinates of
Rr641040 1206 bp proximal
 SNP G/T G G G T G T T T T T T T G G T G
rs32237301
MGI SNP Detail		 Chr6:144991632 Bcat1 within coordinates of
Rr641040 1141 bp proximal
 SNP C/T C C C T C C T C T T T C C C C
rs236223239
MGI SNP Detail		 Chr6:144991865 Bcat1 within coordinates of
Rr641040 908 bp proximal
 SNP A/C A C
rs51975075
MGI SNP Detail		 Chr6:144991873 Bcat1 within coordinates of
Rr641040 900 bp proximal
 SNP G G
rs266239223
MGI SNP Detail		 Chr6:144991949 Bcat1 within coordinates of
Rr641040 824 bp proximal
 SNP A/G G A
rs30603604
MGI SNP Detail		 Chr6:144992090 Bcat1 within coordinates of
Rr641040 683 bp proximal
 SNP C/T C C C T T T C T T T T C
rs30365803
MGI SNP Detail		 Chr6:144992141 Bcat1 within coordinates of
Rr641040 632 bp proximal
 SNP C/G G G C C C G
rs30565114
MGI SNP Detail		 Chr6:144992178 Bcat1 within coordinates of
Rr641040 595 bp proximal
 SNP A/G G G A A A G
rs226678930
MGI SNP Detail		 Chr6:144992197 Bcat1 within coordinates of
Rr641040 576 bp proximal
 SNP A/G A G
rs244892450
MGI SNP Detail		 Chr6:144992201 Bcat1 within coordinates of
Rr641040 572 bp proximal
 SNP C/T C T
rs32237303
MGI SNP Detail		 Chr6:144992317 Bcat1 within coordinates of
Rr641040 456 bp proximal
 SNP C/T T T T T T T C T T T T T T T
rs212708888
MGI SNP Detail		 Chr6:144992546 Bcat1 within coordinates of
Rr641040 227 bp proximal
 SNP A/G G A
rs30513763
MGI SNP Detail		 Chr6:144992554 Bcat1 within coordinates of
Rr641040 219 bp proximal
 SNP A/G G G A A G
rs30957464
MGI SNP Detail		 Chr6:144992627 Bcat1 within coordinates of
Rr641040 146 bp proximal
 SNP C/T T T T C T C C C C C C T
rs254714834
MGI SNP Detail		 Chr6:144992628 Bcat1 within coordinates of
Rr641040 145 bp proximal
 SNP A/G G A
rs32238246
MGI SNP Detail		 Chr6:144992693 Bcat1 within coordinates of
Rr641040 80 bp proximal
 SNP C/G G C C C C C C C
rs30017169
MGI SNP Detail		 Chr6:144992696 Bcat1 within coordinates of
Rr641040 77 bp proximal
 SNP A/G A A G
rs30803240
MGI SNP Detail		 Chr6:144992697 Bcat1 within coordinates of
Rr641040 76 bp proximal
 SNP A/G A A G
rs32238248
MGI SNP Detail		 Chr6:144992908 Bcat1 within coordinates of
Rr641040 within coordinates of
 SNP C/G C C C C C C G C C C C C
rs30859343
MGI SNP Detail		 Chr6:144993030 Bcat1 within coordinates of
Rr641040 within coordinates of
 SNP C/T T T C T C C C C C C C T
rs29967950
MGI SNP Detail		 Chr6:144993191 Bcat1 within coordinates of
Rr641040 within coordinates of
 SNP C/T C C C T C C T T C T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs30363839
MGI SNP Detail		 Chr6:144993258 Bcat1 within coordinates of
Rr641040 within coordinates of
Tssr64031 within coordinates of
 SNP A/G G G A A G
rs30694394
MGI SNP Detail		 Chr6:144993264 Bcat1 within coordinates of
Gm15687 within coordinates of
Rr641040 within coordinates of
Tssr64031 within coordinates of
 SNP A/C A A C
rs29884858
MGI SNP Detail		 Chr6:144993268 Bcat1 within coordinates of
Gm15687 within coordinates of
Rr641040 within coordinates of
Tssr64031 within coordinates of
 SNP A/G A A G G A
rs30313406
MGI SNP Detail		 Chr6:144993377 Bcat1 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 82 bp distal
Tssr64033 within coordinates of
 SNP C/T C C C T C C T T T T T T T C C C C C
rs219874198
MGI SNP Detail		 Chr6:144993399 Bcat1 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 104 bp distal
Tssr64034 within coordinates of
 SNP C/G C G
rs231194469
MGI SNP Detail		 Chr6:144993861 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 566 bp distal
 SNP A/G G A
rs30470302
MGI SNP Detail		 Chr6:144993948 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 653 bp distal
 SNP C/G C G G C
rs30266192
MGI SNP Detail		 Chr6:144993968 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 673 bp distal
 SNP A/C A C C A
rs244339856
MGI SNP Detail		 Chr6:144994041 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 746 bp distal
 SNP C/T C T
rs264629800
MGI SNP Detail		 Chr6:144994084 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 789 bp distal
 SNP A/G G A
rs226634426
MGI SNP Detail		 Chr6:144994403 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 1108 bp distal
Tssr64039 within coordinates of
 SNP C/G G C
rs246532858
MGI SNP Detail		 Chr6:144994555 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 1260 bp distal
Rr641041 within coordinates of
 SNP A/T A T
rs32238253
MGI SNP Detail		 Chr6:144994802 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 1507 bp distal
Rr641041 within coordinates of
Tssr2055 within coordinates of
 SNP G/T G G G G G G T G G G G
rs30763704
MGI SNP Detail		 Chr6:144994895 Bcat1 within coordinates of
Cpgi18152 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 1600 bp distal
Rr641041 within coordinates of
 SNP A/T T T T A T T A A T A A A A A T
rs30410502
MGI SNP Detail		 Chr6:144994960 Bcat1 within coordinates of
Gm15687 within coordinates of
Gm26666 within coordinates of
Rr641040 1665 bp distal
Rr641041 within coordinates of
 SNP C/T C C C T C C T T C T T T C C
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Showing SNP(s) 1 - 40 of 40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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