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Mouse SNP Summary
Symbol
Name
ID 		Rr689705
regulatory region 689705
MGI:8151837

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580219800
MGI SNP Detail
Alliance Variant		 ChrX:7832278 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Rr689702 within coordinates of
Rr689705 1861 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583864202
MGI SNP Detail
Alliance Variant		 ChrX:7832319 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Rr689702 within coordinates of
Rr689705 1820 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223551451
MGI SNP Detail
Alliance Variant		 ChrX:7832417 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Rr689702 within coordinates of
Rr689705 1722 bp proximal
 SNP A/C C A
rs215454247
MGI SNP Detail
Alliance Variant		 ChrX:7832525 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Rr689702 within coordinates of
Rr689705 1614 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs33379927
MGI SNP Detail
Alliance Variant		 ChrX:7832579 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689702 within coordinates of
Rr689705 1560 bp proximal
Tssr160483 within coordinates of
 SNP G/T T T T T T T T T T T T T G T
rs241577154
MGI SNP Detail
Alliance Variant		 ChrX:7832691 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689703 within coordinates of
Rr689705 1448 bp proximal
 SNP A/C A C
rs264924166
MGI SNP Detail
Alliance Variant		 ChrX:7832702 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689703 within coordinates of
Rr689705 1437 bp proximal
 SNP A/T T A
rs222174691
MGI SNP Detail
Alliance Variant		 ChrX:7832703 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689703 within coordinates of
Rr689705 1436 bp proximal
 SNP A/T T A
rs33379930
MGI SNP Detail
Alliance Variant		 ChrX:7832890 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1249 bp proximal
 SNP C/G G G G G G G G G G C G G C G
rs33379933
MGI SNP Detail
Alliance Variant		 ChrX:7832949 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1190 bp proximal
 SNP C/T C C C C C C T C C C C C C C
rs222903126
MGI SNP Detail
Alliance Variant		 ChrX:7832950 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1189 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs235428185
MGI SNP Detail
Alliance Variant		 ChrX:7832976 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1163 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253452288
MGI SNP Detail
Alliance Variant		 ChrX:7833085 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1054 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C
rs580614614
MGI SNP Detail
Alliance Variant		 ChrX:7833086 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1053 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224091520
MGI SNP Detail
Alliance Variant		 ChrX:7833118 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1021 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs246810707
MGI SNP Detail
Alliance Variant		 ChrX:7833124 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1015 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33380825
MGI SNP Detail
Alliance Variant		 ChrX:7833148 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 991 bp proximal
 SNP C/T T T T T T T C T T T T T T T
rs582840566
MGI SNP Detail
Alliance Variant		 ChrX:7833185 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 954 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586691564
MGI SNP Detail
Alliance Variant		 ChrX:7833190 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 949 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580823723
MGI SNP Detail
Alliance Variant		 ChrX:7833192 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 947 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220651376
MGI SNP Detail
Alliance Variant		 ChrX:7833210 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 929 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235632197
MGI SNP Detail
Alliance Variant		 ChrX:7833327 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 812 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259633468
MGI SNP Detail
Alliance Variant		 ChrX:7833377 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 762 bp proximal
 SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A T A A A A
rs228046678
MGI SNP Detail
Alliance Variant		 ChrX:7833385 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 754 bp proximal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs245785769
MGI SNP Detail
Alliance Variant		 ChrX:7833474 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 665 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265567737
MGI SNP Detail
Alliance Variant		 ChrX:7833478 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 661 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs231189053
MGI SNP Detail
Alliance Variant		 ChrX:7833504 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 635 bp proximal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs213266713
MGI SNP Detail
Alliance Variant		 ChrX:7833548 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 591 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33380827
MGI SNP Detail
Alliance Variant		 ChrX:7833588 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 551 bp proximal
 SNP A/T T T T T T T A T T A T T A T
rs248929534
MGI SNP Detail
Alliance Variant		 ChrX:7833599 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 540 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216757986
MGI SNP Detail
Alliance Variant		 ChrX:7833624 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 515 bp proximal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs587198486
MGI SNP Detail
Alliance Variant		 ChrX:7833637 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 502 bp proximal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs234917173
MGI SNP Detail
Alliance Variant		 ChrX:7833717 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689704 within coordinates of
Rr689705 422 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253046662
MGI SNP Detail
Alliance Variant		 ChrX:7834027 Gata1 Intron
Gata1 mRNA-UTR
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689704 within coordinates of
Rr689705 112 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs215989124
MGI SNP Detail
Alliance Variant		 ChrX:7834301 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs33380829
MGI SNP Detail
Alliance Variant		 ChrX:7834320 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP A/G G G G G G G A G G G G G G G
rs261997606
MGI SNP Detail
Alliance Variant		 ChrX:7834406 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221558213
MGI SNP Detail
Alliance Variant		 ChrX:7834452 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs235833733
MGI SNP Detail
Alliance Variant		 ChrX:7834603 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252921066
MGI SNP Detail
Alliance Variant		 ChrX:7834617 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240644277
MGI SNP Detail
Alliance Variant		 ChrX:7834807 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 168 bp distal
 SNP A/G G A
rs221760641
MGI SNP Detail
Alliance Variant		 ChrX:7834864 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 225 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs33380832
MGI SNP Detail
Alliance Variant		 ChrX:7834887 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 248 bp distal
 SNP A/G A A A A A A A A A G A A G A
rs33382004
MGI SNP Detail
Alliance Variant		 ChrX:7834913 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 274 bp distal
 SNP A/G A A A A A A G A A A G A A G A
rs231481326
MGI SNP Detail
Alliance Variant		 ChrX:7834927 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 288 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs243535979
MGI SNP Detail
Alliance Variant		 ChrX:7834954 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 315 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs581331287
MGI SNP Detail
Alliance Variant		 ChrX:7835031 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 392 bp distal
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259633659
MGI SNP Detail
Alliance Variant		 ChrX:7835059 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 420 bp distal
 SNP A/G A G
rs226569086
MGI SNP Detail
Alliance Variant		 ChrX:7835094 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 455 bp distal
 SNP G/T G T
rs264958952
MGI SNP Detail
Alliance Variant		 ChrX:7835161 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 522 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs224529857
MGI SNP Detail
Alliance Variant		 ChrX:7835173 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 534 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257807604
MGI SNP Detail
Alliance Variant		 ChrX:7835187 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 548 bp distal
 SNP A/C C A
rs249193976
MGI SNP Detail
Alliance Variant		 ChrX:7835256 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 617 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216726736
MGI SNP Detail
Alliance Variant		 ChrX:7835276 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 637 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228150543
MGI SNP Detail
Alliance Variant		 ChrX:7835332 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 693 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257454156
MGI SNP Detail
Alliance Variant		 ChrX:7835387 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 748 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215002136
MGI SNP Detail
Alliance Variant		 ChrX:7835398 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 759 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238914091
MGI SNP Detail
Alliance Variant		 ChrX:7835407 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 768 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33382006
MGI SNP Detail
Alliance Variant		 ChrX:7835419 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 780 bp distal
 SNP C/T T T T T T T T T T C T T C T
rs213113326
MGI SNP Detail
Alliance Variant		 ChrX:7835439 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 800 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229941154
MGI SNP Detail
Alliance Variant		 ChrX:7835456 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 817 bp distal
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253182058
MGI SNP Detail
Alliance Variant		 ChrX:7835490 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 851 bp distal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221739534
MGI SNP Detail
Alliance Variant		 ChrX:7835542 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 903 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239731289
MGI SNP Detail
Alliance Variant		 ChrX:7835555 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 916 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585050267
MGI SNP Detail
Alliance Variant		 ChrX:7835556 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 917 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262767936
MGI SNP Detail
Alliance Variant		 ChrX:7835570 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 931 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223189065
MGI SNP Detail
Alliance Variant		 ChrX:7835581 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 942 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33382008
MGI SNP Detail
Alliance Variant		 ChrX:7835622 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 983 bp distal
 SNP A/C A A A A A A A A C A A C A
rs262065170
MGI SNP Detail
Alliance Variant		 ChrX:7835643 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1004 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224490287
MGI SNP Detail
Alliance Variant		 ChrX:7835651 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1012 bp distal
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243093509
MGI SNP Detail
Alliance Variant		 ChrX:7835744 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1105 bp distal
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs260961302
MGI SNP Detail
Alliance Variant		 ChrX:7835792 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1153 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579232872
MGI SNP Detail
Alliance Variant		 ChrX:7835807 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1168 bp distal
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582839063
MGI SNP Detail
Alliance Variant		 ChrX:7835812 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1173 bp distal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs228128675
MGI SNP Detail
Alliance Variant		 ChrX:7835816 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1177 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A G A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583941056
MGI SNP Detail
Alliance Variant		 ChrX:7835829 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1190 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578435867
MGI SNP Detail
Alliance Variant		 ChrX:7835830 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1191 bp distal
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581923411
MGI SNP Detail
Alliance Variant		 ChrX:7835831 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1192 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs252387950
MGI SNP Detail
Alliance Variant		 ChrX:7835897 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1258 bp distal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A A A A A A A A A A A A T A A A A A A T A A A A
rs265307520
MGI SNP Detail
Alliance Variant		 ChrX:7835928 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1289 bp distal
 SNP A/C A A A A C A A A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A C A A C C A A A A A A A A C
rs230137538
MGI SNP Detail
Alliance Variant		 ChrX:7836024 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1385 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254406064
MGI SNP Detail
Alliance Variant		 ChrX:7836046 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1407 bp distal
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs212738308
MGI SNP Detail
Alliance Variant		 ChrX:7836051 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1412 bp distal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs229909689
MGI SNP Detail
Alliance Variant		 ChrX:7836054 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1415 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33382009
MGI SNP Detail
Alliance Variant		 ChrX:7836127 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1488 bp distal
 SNP C/T C C C C C C T C C T C C T C
rs216688462
MGI SNP Detail
Alliance Variant		 ChrX:7836162 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1523 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240579867
MGI SNP Detail
Alliance Variant		 ChrX:7836335 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1696 bp distal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258279603
MGI SNP Detail
Alliance Variant		 ChrX:7836547 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1908 bp distal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33382012
MGI SNP Detail
Alliance Variant		 ChrX:7836633 Gata1 Intron
Gm14820 within coordinates of
Gm39488 within coordinates of
Gm52419 within coordinates of
Rr689705 1994 bp distal
 SNP A/G G G G G G G G G A G G A G
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Showing SNP(s) 1 - 89 of 89
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory