About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		D3Mit103
DNA segment, Chr 3, Massachusetts Institute of Technology 103
MGI:92368

<< first < prev1 next > last >>
Showing SNP(s) 1 - 65 of 65

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241307325
MGI SNP Detail		 Chr3:107374939 D3Mit103 1997 bp proximal
Slc6a17 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33770645
MGI SNP Detail		 Chr3:107374997 D3Mit103 1939 bp proximal
Slc6a17 within coordinates of
 SNP A/G A A A A A A G A A A A A A A A
rs46432332
MGI SNP Detail		 Chr3:107375110 D3Mit103 1826 bp proximal
Slc6a17 within coordinates of
 SNP C/T C T
rs236271393
MGI SNP Detail		 Chr3:107375150 D3Mit103 1786 bp proximal
Slc6a17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31033321
MGI SNP Detail		 Chr3:107375229 D3Mit103 1707 bp proximal
Slc6a17 within coordinates of
 SNP A/G G G A A A A A A G A A A G A G A
rs30499604
MGI SNP Detail		 Chr3:107375231 D3Mit103 1705 bp proximal
Slc6a17 within coordinates of
 SNP A/G A G G
rs253421998
MGI SNP Detail		 Chr3:107375239 D3Mit103 1697 bp proximal
Slc6a17 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216461478
MGI SNP Detail		 Chr3:107375264 D3Mit103 1672 bp proximal
Slc6a17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs30004489
MGI SNP Detail		 Chr3:107375288 D3Mit103 1648 bp proximal
Slc6a17 within coordinates of
 SNP C/T T T C C C C C C C C C T C T T C
rs33770652
MGI SNP Detail		 Chr3:107375328 D3Mit103 1608 bp proximal
Slc6a17 within coordinates of
 SNP G/T T G G G G G T G G G T T G T T G
rs222068571
MGI SNP Detail		 Chr3:107375341 D3Mit103 1595 bp proximal
Slc6a17 within coordinates of
 SNP C/T T C
rs229933117
MGI SNP Detail		 Chr3:107375403 D3Mit103 1533 bp proximal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31312583
MGI SNP Detail		 Chr3:107375535 D3Mit103 1401 bp proximal
Slc6a17 within coordinates of
 SNP A/T A A T T T T T T A T T T A T A A T
rs214731208
MGI SNP Detail		 Chr3:107375550 D3Mit103 1386 bp proximal
Slc6a17 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33771587
MGI SNP Detail		 Chr3:107375558 D3Mit103 1378 bp proximal
Slc6a17 within coordinates of
 SNP A/G G G G A G G G G G G A G G G G G G
rs259353130
MGI SNP Detail		 Chr3:107375596 D3Mit103 1340 bp proximal
Slc6a17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs220602736
MGI SNP Detail		 Chr3:107375658 D3Mit103 1278 bp proximal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234983242
MGI SNP Detail		 Chr3:107375666 D3Mit103 1270 bp proximal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252428099
MGI SNP Detail		 Chr3:107375747 D3Mit103 1189 bp proximal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33771590
MGI SNP Detail		 Chr3:107375778 D3Mit103 1158 bp proximal
Slc6a17 within coordinates of
 SNP A/G A G G G G G A G G G A G A A G
rs240785606
MGI SNP Detail		 Chr3:107375801 D3Mit103 1135 bp proximal
Slc6a17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs265403448
MGI SNP Detail		 Chr3:107375919 D3Mit103 1017 bp proximal
Slc6a17 within coordinates of
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G A G G G G G G G G A A A G G A A A G A G G G A G G G G G G G G
rs261547335
MGI SNP Detail		 Chr3:107375932 D3Mit103 1004 bp proximal
Slc6a17 within coordinates of
 SNP A/G G A
rs580206481
MGI SNP Detail		 Chr3:107376193 D3Mit103 743 bp proximal
Slc6a17 within coordinates of
 SNP A/C A A C C C C C C C C C C C C C C C C C C A C C C C C C C C A A A C C A C A C C C A C C C A C C C C
rs231319311
MGI SNP Detail		 Chr3:107376197 D3Mit103 739 bp proximal
Slc6a17 within coordinates of
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33771593
MGI SNP Detail		 Chr3:107376209 D3Mit103 727 bp proximal
Slc6a17 within coordinates of
 SNP C/T C T T C T T C T T T C C T
rs263322203
MGI SNP Detail		 Chr3:107376329 D3Mit103 607 bp proximal
Slc6a17 within coordinates of
 SNP C/T C C T T T T T T T T T T T T T T T T T T C T T T T C T T T C C T T C C T C T T T C T T T T T T
rs229443489
MGI SNP Detail		 Chr3:107376367 D3Mit103 569 bp proximal
Slc6a17 within coordinates of
 SNP C/T T T T T T T T C T T C T T C T T T T T T C T T T T T
rs30456209
MGI SNP Detail		 Chr3:107376870 D3Mit103 66 bp proximal
Slc6a17 within coordinates of
 SNP A/G A G G G
rs31681503
MGI SNP Detail		 Chr3:107376882 D3Mit103 54 bp proximal
Slc6a17 within coordinates of
 SNP A/C A C C C
rs256919652
MGI SNP Detail		 Chr3:107377146 D3Mit103 74 bp distal
Slc6a17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224336583
MGI SNP Detail		 Chr3:107377159 D3Mit103 87 bp distal
Slc6a17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251576491
MGI SNP Detail		 Chr3:107377168 D3Mit103 96 bp distal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579795542
MGI SNP Detail		 Chr3:107377211 D3Mit103 139 bp distal
Slc6a17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33772486
MGI SNP Detail		 Chr3:107377297 D3Mit103 225 bp distal
Slc6a17 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs33772489
MGI SNP Detail		 Chr3:107377350 D3Mit103 278 bp distal
Slc6a17 within coordinates of
 SNP C/T C T T C T T C T T T C C C C T C
rs258188278
MGI SNP Detail		 Chr3:107377373 D3Mit103 301 bp distal
Slc6a17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215085363
MGI SNP Detail		 Chr3:107377379 D3Mit103 307 bp distal
Slc6a17 within coordinates of
 SNP C/T T T T C C C C C C C C C C C C C C C C C C C T C C C C C C C C T T T C C T T T C T C C C T C C C T C C C C
rs228091846
MGI SNP Detail		 Chr3:107377398 D3Mit103 326 bp distal
Slc6a17 within coordinates of
 SNP A/G G A
rs30510156
MGI SNP Detail		 Chr3:107377428 D3Mit103 356 bp distal
Slc6a17 within coordinates of
 SNP A/G A A G G G G G G A G G G G G G G
rs33773255
MGI SNP Detail		 Chr3:107377557 D3Mit103 485 bp distal
Slc6a17 within coordinates of
 SNP A/G G A A A A A A A A A G A G G A
rs33773258
MGI SNP Detail		 Chr3:107377659 D3Mit103 587 bp distal
Slc6a17 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs31321678
MGI SNP Detail		 Chr3:107377693 D3Mit103 621 bp distal
Slc6a17 within coordinates of
 SNP A/G G G A G G G
rs30162236
MGI SNP Detail		 Chr3:107377707 D3Mit103 635 bp distal
Slc6a17 within coordinates of
 SNP C/T T C C C C C C C C C C T C T C
rs246897108
MGI SNP Detail		 Chr3:107377776 D3Mit103 704 bp distal
Slc6a17 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs3683649
MGI SNP Detail		 Chr3:107377881 D3Mit103 809 bp distal
Slc6a17 within coordinates of
 SNP C/T C T T T T T T C T T T C T C T
rs3683668
MGI SNP Detail		 Chr3:107377889 D3Mit103 817 bp distal
Slc6a17 within coordinates of
 SNP C/T C T T T T T C T T C T T
rs242259507
MGI SNP Detail		 Chr3:107377930 D3Mit103 858 bp distal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256979603
MGI SNP Detail		 Chr3:107377996 D3Mit103 924 bp distal
Slc6a17 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs227904343
MGI SNP Detail		 Chr3:107377997 D3Mit103 925 bp distal
Slc6a17 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs3684333
MGI SNP Detail		 Chr3:107378017 D3Mit103 945 bp distal
Slc6a17 within coordinates of
 SNP C/G C G G C G G G C G G G C C C C G C
rs253178815
MGI SNP Detail		 Chr3:107378100 D3Mit103 1028 bp distal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C
rs215143725
MGI SNP Detail		 Chr3:107378148 D3Mit103 1076 bp distal
Slc6a17 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235116129
MGI SNP Detail		 Chr3:107378182 D3Mit103 1110 bp distal
Slc6a17 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246577597
MGI SNP Detail		 Chr3:107378252 D3Mit103 1180 bp distal
Slc6a17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs47973550
MGI SNP Detail		 Chr3:107378287 D3Mit103 1215 bp distal
Slc6a17 within coordinates of
 SNP C C C
rs6259798
MGI SNP Detail		 Chr3:107378450 D3Mit103 1378 bp distal
Slc6a17 within coordinates of
 SNP A/G A A G A A G G G A A A G A A G A A
rs6259909
MGI SNP Detail		 Chr3:107378515 D3Mit103 1443 bp distal
Slc6a17 within coordinates of
 SNP A/G A A G G G G G G G A G G G A G A G
rs6260343
MGI SNP Detail		 Chr3:107378569 D3Mit103 1497 bp distal
Slc6a17 within coordinates of
 SNP A/C C C A A C A A A C C A A A C C C C C A C
rs6260794
MGI SNP Detail		 Chr3:107378629 D3Mit103 1557 bp distal
Slc6a17 within coordinates of
 SNP C/T T C C T
rs253260470
MGI SNP Detail		 Chr3:107378754 D3Mit103 1682 bp distal
Slc6a17 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581033030
MGI SNP Detail		 Chr3:107378952 D3Mit103 1880 bp distal
Slc6a17 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250727055
MGI SNP Detail		 Chr3:107378969 D3Mit103 1897 bp distal
Slc6a17 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs220397591
MGI SNP Detail		 Chr3:107378972 D3Mit103 1900 bp distal
Slc6a17 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs33775395
MGI SNP Detail		 Chr3:107379050 D3Mit103 1978 bp distal
Slc6a17 within coordinates of
 SNP C/T T T T C T T C T T T C T C T C T C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 65 of 65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
Building initial tooltip...