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Mouse SNP Summary
Symbol
Name
ID 		D7Mit57
DNA segment, Chr 7, Massachusetts Institute of Technology 57
MGI:94080

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244834681
MGI SNP Detail		 Chr7:19429697 D7Mit57 1999 bp proximal
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581976597
MGI SNP Detail		 Chr7:19429736 D7Mit57 1960 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265196496
MGI SNP Detail		 Chr7:19429779 D7Mit57 1917 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585977080
MGI SNP Detail		 Chr7:19429821 D7Mit57 1875 bp proximal
 SNP C/G C G G G G G C G C G G G G G G G G C G G G G G G C G G G C G G C G C G C G G G G C G G C G G G G G G
rs229370379
MGI SNP Detail		 Chr7:19429834 D7Mit57 1862 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237851371
MGI SNP Detail		 Chr7:19429889 D7Mit57 1807 bp proximal
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255790904
MGI SNP Detail		 Chr7:19429903 D7Mit57 1793 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs229493793
MGI SNP Detail		 Chr7:19429907 D7Mit57 1789 bp proximal
 SNP A/T T T A A A A A T A T A A A A A A A A T A T A A A A T A A A T A T T A T A T A T A A T A A T A A A A A A
rs248254944
MGI SNP Detail		 Chr7:19429909 D7Mit57 1787 bp proximal
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232570468
MGI SNP Detail		 Chr7:19429980 D7Mit57 1716 bp proximal
 SNP A/G G G G G G A G A G G G G G G G A G A G G G G A G G G A G A A G A G A G A G G A G G A G G G G
rs587230273
MGI SNP Detail		 Chr7:19429995 D7Mit57 1701 bp proximal
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579835451
MGI SNP Detail		 Chr7:19430012 D7Mit57 1684 bp proximal
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs583387074
MGI SNP Detail		 Chr7:19430023 D7Mit57 1673 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587006147
MGI SNP Detail
Alliance Variant		 Chr7:19430047 Apoe mRNA-UTR
D7Mit57 1649 bp proximal
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251637003
MGI SNP Detail
Alliance Variant		 Chr7:19430081 Apoe mRNA-UTR
D7Mit57 1615 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214298787
MGI SNP Detail
Alliance Variant		 Chr7:19430157 Apoe mRNA-UTR
D7Mit57 1539 bp proximal
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32422502
MGI SNP Detail
Alliance Variant		 Chr7:19430251 Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 1445 bp proximal
Tssr64881 within coordinates of
Tssr70973 within coordinates of
 SNP A/G G A A A G G A A A G G G A
rs248348952
MGI SNP Detail
Alliance Variant		 Chr7:19430283 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 1413 bp proximal
Tssr70974 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584362425
MGI SNP Detail
Alliance Variant		 Chr7:19430317 Apoe Coding-Synonymous
Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 1379 bp proximal
Tssr64882 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217423654
MGI SNP Detail
Alliance Variant		 Chr7:19430322 Apoe Coding-NonSynonymous
Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 1374 bp proximal
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6252328
MGI SNP Detail
Alliance Variant		 Chr7:19430635 Apoe Coding-Synonymous
Apoe Intron
Apoe Noncoding-Transcript-Variant
Cpgi18507 within coordinates of
D7Mit57 1061 bp proximal
Rr643241 within coordinates of
Tssr2116 within coordinates of
 SNP A/G G A A A G A G G A A G G A
rs252532901
MGI SNP Detail
Alliance Variant		 Chr7:19430680 Apoe Coding-Synonymous
Apoe Noncoding-Transcript-Variant
Cpgi18507 within coordinates of
D7Mit57 1016 bp proximal
Rr643241 within coordinates of
Tssr2117 within coordinates of
Tssr70988 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13463654
MGI SNP Detail
Alliance Variant		 Chr7:19430752 Apoe Coding-NonSynonymous
Apoe Noncoding-Transcript-Variant
Cpgi18507 within coordinates of
D7Mit57 944 bp proximal
Rr643241 within coordinates of
 SNP G/T G G T G G G G T T G G G G G T
rs13463662
MGI SNP Detail
Alliance Variant		 Chr7:19430962 Apoe Coding-Synonymous
Apoe Noncoding-Transcript-Variant
Cpgi18507 within coordinates of
D7Mit57 734 bp proximal
Rr643241 within coordinates of
Tssr64893 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579057030
MGI SNP Detail
Alliance Variant		 Chr7:19431121 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 575 bp proximal
Gm71725 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257796922
MGI SNP Detail
Alliance Variant		 Chr7:19431228 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 468 bp proximal
Gm71725 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221727012
MGI SNP Detail
Alliance Variant		 Chr7:19431247 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 449 bp proximal
Gm71725 within coordinates of
 SNP C/G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T G T T T T T T T T T T T T T C T T T T
rs237711936
MGI SNP Detail
Alliance Variant		 Chr7:19431295 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 401 bp proximal
Gm71725 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255846414
MGI SNP Detail
Alliance Variant		 Chr7:19431338 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 358 bp proximal
Gm71725 within coordinates of
 SNP G/T T T T G G G G G T G T T G G G G G G G T T G T G G G G T G G T G T T G T G T G T G G T G G T T G G G G
rs229012447
MGI SNP Detail
Alliance Variant		 Chr7:19431378 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 318 bp proximal
Gm71725 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs242303724
MGI SNP Detail
Alliance Variant		 Chr7:19431578 Apoe Intron
Apoe Noncoding-Transcript-Variant
Apoe Splice-Site
D7Mit57 118 bp proximal
Gm71725 within coordinates of
Tssr71004 within coordinates of
 SNP A/T A A A T T T T T A T A A T T T T T T T T A T A T T T T A T T T A T A A T A T A T A T T A T T A A T T T T
rs265785350
MGI SNP Detail
Alliance Variant		 Chr7:19431615 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 81 bp proximal
Gm71725 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231857383
MGI SNP Detail
Alliance Variant		 Chr7:19431629 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 67 bp proximal
Gm71725 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256734569
MGI SNP Detail
Alliance Variant		 Chr7:19431701 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 within coordinates of
Gm71725 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214232185
MGI SNP Detail
Alliance Variant		 Chr7:19431829 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 within coordinates of
Gm71725 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224503534
MGI SNP Detail
Alliance Variant		 Chr7:19431845 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 1 bp distal
Gm71725 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242371385
MGI SNP Detail
Alliance Variant		 Chr7:19431846 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 2 bp distal
Gm71725 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217465390
MGI SNP Detail
Alliance Variant		 Chr7:19431863 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 19 bp distal
Gm71725 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234528196
MGI SNP Detail
Alliance Variant		 Chr7:19431878 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 34 bp distal
Gm71725 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs259592488
MGI SNP Detail
Alliance Variant		 Chr7:19431900 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 56 bp distal
Gm71725 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31678592
MGI SNP Detail
Alliance Variant		 Chr7:19432031 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 187 bp distal
Gm71725 within coordinates of
 SNP A/G G G A A A G G A G A A A G G G G A
rs582661799
MGI SNP Detail
Alliance Variant		 Chr7:19432214 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 370 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
Rr643243 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs8252878
MGI SNP Detail
Alliance Variant		 Chr7:19432252 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 408 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP A/G G G A A A A A A G A G A A G G G
rs8252877
MGI SNP Detail
Alliance Variant		 Chr7:19432318 Apoe Intron
Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 474 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
Tssr71011 within coordinates of
 SNP A/C C C C C C C C C C C C A C C C C C C C C C C C C
rs32423368
MGI SNP Detail
Alliance Variant		 Chr7:19432550 Apoe Intron
Apoe Noncoding-Transcript-Variant
Cpgi18508 within coordinates of
D7Mit57 706 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T C T T T C C C T T C C C C T
rs32423370
MGI SNP Detail
Alliance Variant		 Chr7:19432664 Apoe Intron
Apoe Noncoding-Transcript-Variant
Cpgi18508 within coordinates of
D7Mit57 820 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T T C C C T T C C C C T T T T C
rs32423372
MGI SNP Detail
Alliance Variant		 Chr7:19432690 Apoe Intron
Apoe Noncoding-Transcript-Variant
Cpgi18508 within coordinates of
D7Mit57 846 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T C T T T C C C T T T C C C C T
rs32424374
MGI SNP Detail
Alliance Variant		 Chr7:19432707 Apoe Intron
Apoe Noncoding-Transcript-Variant
Cpgi18508 within coordinates of
D7Mit57 863 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T T T C C C T T T C C C T T T T C
rs581765339
MGI SNP Detail
Alliance Variant		 Chr7:19432755 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 911 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585472850
MGI SNP Detail
Alliance Variant		 Chr7:19432759 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 915 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32424376
MGI SNP Detail
Alliance Variant		 Chr7:19432772 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 928 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP A/C A A A A A A C A A A A A A A A
rs32424378
MGI SNP Detail
Alliance Variant		 Chr7:19432789 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 945 bp distal
Gm71725 within coordinates of
Rr643242 within coordinates of
 SNP A/C C A A A C C C A A A C C C C A
rs241795952
MGI SNP Detail
Alliance Variant		 Chr7:19432830 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 986 bp distal
Gm71725 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263438924
MGI SNP Detail
Alliance Variant		 Chr7:19432860 Apoe Intron
Apoe Noncoding-Transcript-Variant
D7Mit57 1016 bp distal
Gm71725 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224567435
MGI SNP Detail
Alliance Variant		 Chr7:19432946 Apoe mRNA-UTR
Apoe Noncoding-Transcript-Variant
D7Mit57 1102 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244433679
MGI SNP Detail
Alliance Variant		 Chr7:19432998 Apoe mRNA-UTR
D7Mit57 1154 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265179813
MGI SNP Detail
Alliance Variant		 Chr7:19433060 Apoe mRNA-UTR
D7Mit57 1216 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224806377
MGI SNP Detail
Alliance Variant		 Chr7:19433092 Apoe mRNA-UTR
D7Mit57 1248 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242428297
MGI SNP Detail
Alliance Variant		 Chr7:19433139 Apoe mRNA-UTR
D7Mit57 1295 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs32424380
MGI SNP Detail
Alliance Variant		 Chr7:19433218 Apoe mRNA-UTR
D7Mit57 1374 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/T T T A A A T T A A A A T T T T A
rs228463543
MGI SNP Detail
Alliance Variant		 Chr7:19433220 Apoe mRNA-UTR
D7Mit57 1376 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258487635
MGI SNP Detail
Alliance Variant		 Chr7:19433221 Apoe mRNA-UTR
D7Mit57 1377 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215907097
MGI SNP Detail
Alliance Variant		 Chr7:19433241 Apoe mRNA-UTR
D7Mit57 1397 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239854603
MGI SNP Detail
Alliance Variant		 Chr7:19433284 Apoe mRNA-UTR
D7Mit57 1440 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50636189
MGI SNP Detail
Alliance Variant		 Chr7:19433290 Apoe mRNA-UTR
D7Mit57 1446 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/G A G
rs46906469
MGI SNP Detail
Alliance Variant		 Chr7:19433291 Apoe mRNA-UTR
D7Mit57 1447 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP G/T T G
rs32424382
MGI SNP Detail
Alliance Variant		 Chr7:19433361 Apoe mRNA-UTR
D7Mit57 1517 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T T T C C C T T C C C C T T C C
rs32425134
MGI SNP Detail
Alliance Variant		 Chr7:19433366 Apoe mRNA-UTR
D7Mit57 1522 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/G C C G C C G G G G C C G G
rs32425136
MGI SNP Detail
Alliance Variant		 Chr7:19433399 Apoe mRNA-UTR
D7Mit57 1555 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/T T T A A A T T A A A T T T T A
rs239130143
MGI SNP Detail
Alliance Variant		 Chr7:19433440 Apoe mRNA-UTR
D7Mit57 1596 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32425138
MGI SNP Detail
Alliance Variant		 Chr7:19433480 Apoe mRNA-UTR
D7Mit57 1636 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/G G G A A A G G A A A G G G G A
rs32425140
MGI SNP Detail
Alliance Variant		 Chr7:19433500 Apoe mRNA-UTR
D7Mit57 1656 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP A/G G G A A A G G A A A A G G G G A
rs32425142
MGI SNP Detail
Alliance Variant		 Chr7:19433551 Apoe mRNA-UTR
D7Mit57 1707 bp distal
Gm71725 within coordinates of
Rr643244 within coordinates of
 SNP C/T T C C C T C C C C T T T T C
rs262512066
MGI SNP Detail
Alliance Variant		 Chr7:19433606 Apoe mRNA-UTR
D7Mit57 1762 bp distal
Gm71725 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs218866509
MGI SNP Detail
Alliance Variant		 Chr7:19433609 Apoe mRNA-UTR
D7Mit57 1765 bp distal
Gm71725 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129/Sv
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MRL/MpJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580252915
MGI SNP Detail
Alliance Variant		 Chr7:19433630 Apoe mRNA-UTR
D7Mit57 1786 bp distal
Gm71725 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs45728809
MGI SNP Detail
Alliance Variant		 Chr7:19433641 Apoe mRNA-UTR
D7Mit57 1797 bp distal
Gm71725 within coordinates of
 SNP C/T C T
rs32425864
MGI SNP Detail
Alliance Variant		 Chr7:19433694 Apoe mRNA-UTR
D7Mit57 1850 bp distal
Gm71725 within coordinates of
 SNP C/T T C C C T T T C C C T T T T C
rs32425866
MGI SNP Detail
Alliance Variant		 Chr7:19433717 Apoe mRNA-UTR
D7Mit57 1873 bp distal
Gm71725 within coordinates of
 SNP A/G G G A A A G G A A A A G G A
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Showing SNP(s) 1 - 79 of 79
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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