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Mouse SNP Summary
Symbol
Name
ID 		Sim2
single-minded family bHLH transcription factor 2
MGI:98307

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257596068
MGI SNP Detail		 Chr16:93883978 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1985 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229317232
MGI SNP Detail		 Chr16:93883989 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1974 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs240872195
MGI SNP Detail		 Chr16:93883997 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1966 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262049923
MGI SNP Detail		 Chr16:93884053 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1910 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs6406950
MGI SNP Detail		 Chr16:93884087 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1876 bp upstream
 SNP C/G G G G G G C G G G G G C G
rs6406993
MGI SNP Detail		 Chr16:93884107 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1856 bp upstream
 SNP A/G G A
rs214982062
MGI SNP Detail		 Chr16:93884115 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1848 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225597689
MGI SNP Detail		 Chr16:93884157 Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1806 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs6309950
MGI SNP Detail		 Chr16:93884275 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1688 bp upstream
 SNP C/T T C
rs215128644
MGI SNP Detail		 Chr16:93884324 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1639 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236075860
MGI SNP Detail		 Chr16:93884338 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1625 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263618525
MGI SNP Detail		 Chr16:93884357 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1606 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212649068
MGI SNP Detail		 Chr16:93884367 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1596 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235972594
MGI SNP Detail		 Chr16:93884391 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1572 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257599472
MGI SNP Detail		 Chr16:93884447 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1516 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222487543
MGI SNP Detail		 Chr16:93884460 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1503 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs240278210
MGI SNP Detail		 Chr16:93884472 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1491 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251579019
MGI SNP Detail		 Chr16:93884504 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1459 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs223070511
MGI SNP Detail		 Chr16:93884601 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1362 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240931778
MGI SNP Detail		 Chr16:93884609 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1354 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264880868
MGI SNP Detail		 Chr16:93884636 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1327 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs6312053
MGI SNP Detail		 Chr16:93884647 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1316 bp upstream
 SNP A/C C A
rs227948131
MGI SNP Detail		 Chr16:93884650 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1313 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247088162
MGI SNP Detail		 Chr16:93884668 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520040 within coordinates of
Sim2 1295 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262436368
MGI SNP Detail		 Chr16:93884722 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm49620 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 1241 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A C A C A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225662776
MGI SNP Detail		 Chr16:93884791 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 1172 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A T A T A A A A A A A T A A A A
rs247112325
MGI SNP Detail		 Chr16:93884926 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 1037 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215191556
MGI SNP Detail		 Chr16:93884996 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 967 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T C T C T T T T T T T C T T T T
rs229200741
MGI SNP Detail		 Chr16:93885061 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 902 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G C G C G G G G G G G C G G G G
rs253666507
MGI SNP Detail		 Chr16:93885098 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 865 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3148881
MGI SNP Detail		 Chr16:93885208 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520041 within coordinates of
Sim2 755 bp upstream
 SNP C/G G G C C C
rs234277787
MGI SNP Detail		 Chr16:93885228 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Sim2 735 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262337857
MGI SNP Detail		 Chr16:93885238 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Sim2 725 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs213411640
MGI SNP Detail		 Chr16:93885328 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 635 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584888645
MGI SNP Detail		 Chr16:93885360 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 603 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs578933921
MGI SNP Detail		 Chr16:93885361 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 602 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233843249
MGI SNP Detail		 Chr16:93885440 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 523 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251460192
MGI SNP Detail		 Chr16:93885454 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 509 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs4220258
MGI SNP Detail		 Chr16:93885468 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 495 bp upstream
 SNP G/T G G T G T
rs223136154
MGI SNP Detail		 Chr16:93885551 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 412 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C T C T C C C C C C C C C C C C
rs241160617
MGI SNP Detail		 Chr16:93885553 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 410 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T C T C T T T T T T T T T T T
rs256626558
MGI SNP Detail		 Chr16:93885661 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 302 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220213064
MGI SNP Detail		 Chr16:93885690 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 273 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs108667729
MGI SNP Detail		 Chr16:93885741 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 222 bp upstream
 SNP A/C A C
rs265122870
MGI SNP Detail		 Chr16:93885770 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 193 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222032689
MGI SNP Detail
Alliance Variant		 Chr16:93885797 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520042 within coordinates of
Sim2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241183891
MGI SNP Detail
Alliance Variant		 Chr16:93885930 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520043 within coordinates of
Sim2 mRNA-UTR
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs258961961
MGI SNP Detail
Alliance Variant		 Chr16:93885935 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520043 within coordinates of
Sim2 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs229079997
MGI SNP Detail
Alliance Variant		 Chr16:93885953 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Gm60844 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs259210016
MGI SNP Detail
Alliance Variant		 Chr16:93885985 Cpgi8493 within coordinates of
Gm31175 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261916723
MGI SNP Detail
Alliance Variant		 Chr16:93886028 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs227751442
MGI SNP Detail
Alliance Variant		 Chr16:93886065 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251162368
MGI SNP Detail
Alliance Variant		 Chr16:93886088 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
Tssr139540 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs3148880
MGI SNP Detail
Alliance Variant		 Chr16:93886109 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
Tssr139540 within coordinates of
 SNP C/T C C T T T T T T T T T T T T T T T C C T C C C T T T C T T C T C T T T T C T C T T T T C T T C T T T C
rs233369638
MGI SNP Detail
Alliance Variant		 Chr16:93886134 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245556745
MGI SNP Detail
Alliance Variant		 Chr16:93886196 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3143674
MGI SNP Detail
Alliance Variant		 Chr16:93886202 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP A/G G G G G G A G G A G G G A A A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G
rs239728102
MGI SNP Detail
Alliance Variant		 Chr16:93886304 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A G A G A A A A A A A G A A A A
rs261783722
MGI SNP Detail
Alliance Variant		 Chr16:93886332 Cpgi8493 within coordinates of
Rr520044 within coordinates of
Sim2 mRNA-UTR
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220874363
MGI SNP Detail
Alliance Variant		 Chr16:93886454 Cpgi8493 within coordinates of
Sim2 mRNA-UTR
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs239110162
MGI SNP Detail
Alliance Variant		 Chr16:93886505 Cpgi8493 within coordinates of
Sim2 mRNA-UTR
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251265315
MGI SNP Detail
Alliance Variant		 Chr16:93886531 Cpgi8493 within coordinates of
Sim2 mRNA-UTR
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222084752
MGI SNP Detail
Alliance Variant		 Chr16:93886891 Cpgi8493 within coordinates of
Sim2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C A C A C C C C C C C C C C C
rs3148879
MGI SNP Detail
Alliance Variant		 Chr16:93886916 Cpgi8493 within coordinates of
Sim2 Intron
 SNP A/G A A G G G
rs261366693
MGI SNP Detail
Alliance Variant		 Chr16:93886935 Cpgi8493 within coordinates of
Sim2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G C G C G G G G G G G G G G G G
rs3148878
MGI SNP Detail
Alliance Variant		 Chr16:93886951 Cpgi8493 within coordinates of
Sim2 Intron
 SNP A/G A A G G G
rs247241594
MGI SNP Detail
Alliance Variant		 Chr16:93887026 Cpgi8493 within coordinates of
Sim2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G C G C G G G G G G G C G G G C
rs264863574
MGI SNP Detail
Alliance Variant		 Chr16:93887036 Cpgi8493 within coordinates of
Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T C T C T T T T T T T C T T T C
rs227583141
MGI SNP Detail
Alliance Variant		 Chr16:93887074 Cpgi8493 within coordinates of
Sim2 Intron
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583869408
MGI SNP Detail
Alliance Variant		 Chr16:93887133 Sim2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs255931015
MGI SNP Detail
Alliance Variant		 Chr16:93887136 Sim2 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs52210096
MGI SNP Detail
Alliance Variant		 Chr16:93887143 Sim2 Intron
 SNP C/T C T
rs227238724
MGI SNP Detail
Alliance Variant		 Chr16:93887163 Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245069277
MGI SNP Detail
Alliance Variant		 Chr16:93887184 Sim2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C T C T C C C C C C C T C C C C
rs587146742
MGI SNP Detail
Alliance Variant		 Chr16:93887209 Sim2 Intron
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32735666
MGI SNP Detail
Alliance Variant		 Chr16:93887293 Sim2 Intron
 SNP A/C C A A A
rs580078965
MGI SNP Detail
Alliance Variant		 Chr16:93887347 Sim2 Intron
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583568259
MGI SNP Detail
Alliance Variant		 Chr16:93887353 Sim2 Intron
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C
rs587060884
MGI SNP Detail
Alliance Variant		 Chr16:93887359 Sim2 Intron
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581191063
MGI SNP Detail
Alliance Variant		 Chr16:93887383 Sim2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C
rs584680259
MGI SNP Detail
Alliance Variant		 Chr16:93887389 Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586621286
MGI SNP Detail
Alliance Variant		 Chr16:93887392 Sim2 Intron
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs217149951
MGI SNP Detail
Alliance Variant		 Chr16:93887449 Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs250148982
MGI SNP Detail
Alliance Variant		 Chr16:93887554 Sim2 Intron
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs3148877
MGI SNP Detail
Alliance Variant		 Chr16:93887568 Cpgi8494 within coordinates of
Sim2 Intron
 SNP C/G G C C C
rs237408073
MGI SNP Detail
Alliance Variant		 Chr16:93887603 Cpgi8494 within coordinates of
Sim2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251518356
MGI SNP Detail
Alliance Variant		 Chr16:93887611 Cpgi8494 within coordinates of
Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221952703
MGI SNP Detail
Alliance Variant		 Chr16:93887657 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs233974689
MGI SNP Detail
Alliance Variant		 Chr16:93887679 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs255446441
MGI SNP Detail
Alliance Variant		 Chr16:93887711 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs225932314
MGI SNP Detail
Alliance Variant		 Chr16:93887718 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs250017462
MGI SNP Detail
Alliance Variant		 Chr16:93887722 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs256142923
MGI SNP Detail
Alliance Variant		 Chr16:93887725 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs220129181
MGI SNP Detail
Alliance Variant		 Chr16:93887727 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs6364978
MGI SNP Detail
Alliance Variant		 Chr16:93887728 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G G G G G G A G G G G A A G
rs6365063
MGI SNP Detail
Alliance Variant		 Chr16:93887781 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/T C T
rs6365083
MGI SNP Detail
Alliance Variant		 Chr16:93887791 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G G A
rs238830966
MGI SNP Detail
Alliance Variant		 Chr16:93887804 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259668164
MGI SNP Detail
Alliance Variant		 Chr16:93887894 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs3143673
MGI SNP Detail
Alliance Variant		 Chr16:93888044 Cpgi8494 within coordinates of
Rr520045 within coordinates of
Sim2 Intron
 SNP A/G A A G G
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Showing SNP(s) 1 - 100 of 772
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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