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Mouse SNP Summary
Symbol
Name
ID 		Sox8
SRY (sex determining region Y)-box 8
MGI:98370

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs266186482
MGI SNP Detail		 Chr17:25782867 Sox8 1998 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs108755376
MGI SNP Detail		 Chr17:25782885 Sox8 1980 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579757670
MGI SNP Detail		 Chr17:25782890 Sox8 1975 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583783722
MGI SNP Detail		 Chr17:25782893 Sox8 1972 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587212937
MGI SNP Detail		 Chr17:25782909 Sox8 1956 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240060562
MGI SNP Detail		 Chr17:25782962 Sox8 1903 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs108878761
MGI SNP Detail		 Chr17:25782966 Sox8 1899 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs226030185
MGI SNP Detail		 Chr17:25783022 Sox8 1843 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33768936
MGI SNP Detail		 Chr17:25783039 Sox8 1826 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G A G G G
rs33768935
MGI SNP Detail		 Chr17:25783106 Sox8 1759 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A A A A A G A A G A
rs227979328
MGI SNP Detail		 Chr17:25783110 Sox8 1755 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs33768934
MGI SNP Detail		 Chr17:25783181 Sox8 1684 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G A G G A
rs33775985
MGI SNP Detail		 Chr17:25783274 Sox8 1591 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T C T T C C
rs107920637
MGI SNP Detail		 Chr17:25783331 Sox8 1534 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs107959641
MGI SNP Detail		 Chr17:25783352 Sox8 1513 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214064750
MGI SNP Detail		 Chr17:25783572 Rr523604 within coordinates of
Sox8 1293 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233372701
MGI SNP Detail		 Chr17:25783600 Rr523604 within coordinates of
Sox8 1265 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262206605
MGI SNP Detail		 Chr17:25783637 Rr523604 within coordinates of
Sox8 1228 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33775984
MGI SNP Detail		 Chr17:25783847 Sox8 1018 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C T C C T
rs108705402
MGI SNP Detail		 Chr17:25783861 Sox8 1004 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261028579
MGI SNP Detail		 Chr17:25783913 Sox8 952 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48309992
MGI SNP Detail		 Chr17:25783954 Sox8 911 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A A A A A G A A G A
rs585257597
MGI SNP Detail		 Chr17:25784210 Rr523605 within coordinates of
Sox8 655 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs52359347
MGI SNP Detail		 Chr17:25784251 Rr523605 within coordinates of
Sox8 614 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T C C C C C C C C T C T C
rs257346610
MGI SNP Detail		 Chr17:25784254 Rr523605 within coordinates of
Sox8 611 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220077836
MGI SNP Detail		 Chr17:25784373 Rr523605 within coordinates of
Sox8 492 bp downstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243164960
MGI SNP Detail
Alliance Variant		 Chr17:25784666 Rr523605 within coordinates of
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50238325
MGI SNP Detail
Alliance Variant		 Chr17:25784804 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C A
rs108518971
MGI SNP Detail
Alliance Variant		 Chr17:25784908 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T T G T T G T
rs108256351
MGI SNP Detail
Alliance Variant		 Chr17:25785099 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs580800656
MGI SNP Detail
Alliance Variant		 Chr17:25785258 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs108911253
MGI SNP Detail
Alliance Variant		 Chr17:25785296 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs108105513
MGI SNP Detail
Alliance Variant		 Chr17:25785297 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246228920
MGI SNP Detail
Alliance Variant		 Chr17:25785382 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214125855
MGI SNP Detail
Alliance Variant		 Chr17:25785402 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49353630
MGI SNP Detail
Alliance Variant		 Chr17:25785453 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C T C C C T C C T C
rs251077739
MGI SNP Detail
Alliance Variant		 Chr17:25785467 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213662701
MGI SNP Detail
Alliance Variant		 Chr17:25785510 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49138251
MGI SNP Detail
Alliance Variant		 Chr17:25785566 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/C A C A A A C A A A C A A C C
rs264356287
MGI SNP Detail
Alliance Variant		 Chr17:25786127 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs222168668
MGI SNP Detail
Alliance Variant		 Chr17:25786195 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233761147
MGI SNP Detail
Alliance Variant		 Chr17:25786278 Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251390611
MGI SNP Detail
Alliance Variant		 Chr17:25786436 Cpgi8770 within coordinates of
Sox8 Coding-Synonymous
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220140106
MGI SNP Detail
Alliance Variant		 Chr17:25786789 Cpgi8770 within coordinates of
Sox8 Coding-NonSynonymous
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245997002
MGI SNP Detail
Alliance Variant		 Chr17:25786904 Cpgi8770 within coordinates of
Sox8 Coding-Synonymous
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107703649
MGI SNP Detail
Alliance Variant		 Chr17:25786952 Cpgi8770 within coordinates of
Rr523606 within coordinates of
Sox8 Coding-Synonymous
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs220044467
MGI SNP Detail
Alliance Variant		 Chr17:25787024 Sox8 Coding-Synonymous
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248284869
MGI SNP Detail
Alliance Variant		 Chr17:25787087 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs108717218
MGI SNP Detail
Alliance Variant		 Chr17:25787100 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs227989305
MGI SNP Detail
Alliance Variant		 Chr17:25787307 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108563640
MGI SNP Detail
Alliance Variant		 Chr17:25787381 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C T C
rs258076992
MGI SNP Detail
Alliance Variant		 Chr17:25787499 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs107902657
MGI SNP Detail
Alliance Variant		 Chr17:25787501 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T C
rs49418474
MGI SNP Detail
Alliance Variant		 Chr17:25787559 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G A G G G G
rs229455930
MGI SNP Detail
Alliance Variant		 Chr17:25787606 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253514776
MGI SNP Detail
Alliance Variant		 Chr17:25787612 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs108898697
MGI SNP Detail
Alliance Variant		 Chr17:25787725 Sox8 Intron
Sox8 mRNA-UTR
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A C A
rs228772581
MGI SNP Detail
Alliance Variant		 Chr17:25787768 Sox8 Intron
Sox8 mRNA-UTR
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247778136
MGI SNP Detail
Alliance Variant		 Chr17:25787817 Sox8 Coding-NonSynonymous
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216955248
MGI SNP Detail
Alliance Variant		 Chr17:25788227 Sox8 Intron
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233814878
MGI SNP Detail
Alliance Variant		 Chr17:25788277 Sox8 Intron
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs50738092
MGI SNP Detail
Alliance Variant		 Chr17:25788329 Sox8 Intron
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G A G
rs51366957
MGI SNP Detail
Alliance Variant		 Chr17:25788379 Sox8 Intron
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C G C C C C
rs251402797
MGI SNP Detail
Alliance Variant		 Chr17:25788486 Sox8 Intron
Sox8 Noncoding-Transcript-Variant
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215317448
MGI SNP Detail
Alliance Variant		 Chr17:25788732 Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236295111
MGI SNP Detail
Alliance Variant		 Chr17:25788784 Cpgi8771 within coordinates of
Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46961075
MGI SNP Detail
Alliance Variant		 Chr17:25788821 Cpgi8771 within coordinates of
Sox8 Intron
Tg(CD3E)26Cpt within coordinates of
 SNP C/T T T T T T T T T T T T T T C
rs220490364
MGI SNP Detail
Alliance Variant		 Chr17:25789245 Cpgi8771 within coordinates of
Sox8 Coding-Synonymous
Tg(CD3E)26Cpt within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs51588295
MGI SNP Detail
Alliance Variant		 Chr17:25789272 Cpgi8771 within coordinates of
Sox8 Coding-Synonymous
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A G A A A G A A G G
rs50959852
MGI SNP Detail
Alliance Variant		 Chr17:25789564 Cpgi8771 within coordinates of
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP A/C A A A A A A C A A A C A A C A
rs50106421
MGI SNP Detail
Alliance Variant		 Chr17:25789616 Cpgi8771 within coordinates of
Sox8 mRNA-UTR
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C T C C C T C C T C
rs240359253
MGI SNP Detail		 Chr17:25789904 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 238 bp upstream
Tg(CD3E)26Cpt within coordinates of
Tssr143166 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs107705643
MGI SNP Detail		 Chr17:25789980 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 314 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs47672604
MGI SNP Detail		 Chr17:25790007 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 341 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C G C C C G C C G C
rs241904504
MGI SNP Detail		 Chr17:25790029 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Rr523608 within coordinates of
Sox8 363 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs108382440
MGI SNP Detail		 Chr17:25790050 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 384 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs233551934
MGI SNP Detail		 Chr17:25790119 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 453 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247828065
MGI SNP Detail		 Chr17:25790121 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523607 within coordinates of
Sox8 455 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216970891
MGI SNP Detail		 Chr17:25790159 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 493 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs108266329
MGI SNP Detail		 Chr17:25790168 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 502 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245486639
MGI SNP Detail		 Chr17:25790184 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 518 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215045734
MGI SNP Detail		 Chr17:25790271 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 605 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46293970
MGI SNP Detail		 Chr17:25790291 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 625 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G A G G G
rs108067827
MGI SNP Detail		 Chr17:25790410 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 744 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs256443119
MGI SNP Detail		 Chr17:25790425 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 759 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs48677363
MGI SNP Detail		 Chr17:25790457 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 791 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/C C C C C C A C C C C C C A C
rs48734620
MGI SNP Detail		 Chr17:25790548 Cerox1 within coordinates of
Cpgi8771 within coordinates of
Rr523609 within coordinates of
Sox8 882 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A G A A A G A A G A
rs45936719
MGI SNP Detail		 Chr17:25790614 Cerox1 within coordinates of
Rr523609 within coordinates of
Sox8 948 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/T T T T T A T T A T T A A
rs387176742
MGI SNP Detail		 Chr17:25790628 Cerox1 within coordinates of
Rr523609 within coordinates of
Sox8 962 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G T G G G G G G G G G G G G G T G G G G G G
rs221766100
MGI SNP Detail		 Chr17:25790677 Cerox1 within coordinates of
Rr523609 within coordinates of
Sox8 1011 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240423403
MGI SNP Detail		 Chr17:25790786 Cerox1 within coordinates of
Rr523609 within coordinates of
Sox8 1120 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs107998061
MGI SNP Detail		 Chr17:25790923 Cerox1 within coordinates of
Sox8 1257 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C G C C C C C C G C C C C C C C G C C G C
rs579199524
MGI SNP Detail		 Chr17:25790929 Cerox1 within coordinates of
Sox8 1263 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262399180
MGI SNP Detail		 Chr17:25791049 Cerox1 within coordinates of
Sox8 1383 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222430743
MGI SNP Detail		 Chr17:25791059 Cerox1 within coordinates of
Sox8 1393 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244812378
MGI SNP Detail		 Chr17:25791064 Cerox1 within coordinates of
Sox8 1398 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs261324928
MGI SNP Detail		 Chr17:25791206 Cerox1 within coordinates of
Sox8 1540 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46894774
MGI SNP Detail		 Chr17:25791209 Cerox1 within coordinates of
Sox8 1543 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/G G G G G A G G G G G G G G G
rs240472943
MGI SNP Detail		 Chr17:25791235 Cerox1 within coordinates of
Sox8 1569 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259450043
MGI SNP Detail		 Chr17:25791320 Cerox1 within coordinates of
Sox8 1654 bp upstream
Tg(CD3E)26Cpt within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
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Showing SNP(s) 1 - 100 of 108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory