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Mouse SNP Summary
Symbol
Name
ID 		Defa5
defensin, alpha, 5
MGI:99583

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Showing SNP(s) 1 - 36 of 36

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214430843
MGI SNP Detail		 Chr8:21785475 Defa5 1980 bp upstream
Gm65300 within coordinates of
 SNP A/T A A A T T A A A A A T T T T T T T A T A A A A A A T A A A T A A A A A T A T T
rs587036984
MGI SNP Detail		 Chr8:21785490 Defa5 1965 bp upstream
Gm65300 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580869901
MGI SNP Detail		 Chr8:21785494 Defa5 1961 bp upstream
Gm65300 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C A C A C A C C C C C C C C C C
rs584974477
MGI SNP Detail		 Chr8:21785514 Defa5 1941 bp upstream
Gm65300 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578941760
MGI SNP Detail		 Chr8:21785561 Defa5 1894 bp upstream
Gm65300 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581733170
MGI SNP Detail		 Chr8:21785579 Defa5 1876 bp upstream
Gm65300 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C A C A C C C C C C C C C C C C C
rs585069980
MGI SNP Detail		 Chr8:21785597 Defa5 1858 bp upstream
Gm65300 within coordinates of
 SNP A/C C C A A C C C C C C C C C C C C C C A A C C C C A C C C C A C
rs229941417
MGI SNP Detail		 Chr8:21785683 Defa5 1772 bp upstream
Gm65300 within coordinates of
 SNP A/C/T T T A A T T T T A A A A A A A A C T A T A A T T A T T T T A T A T A T A
rs581904374
MGI SNP Detail		 Chr8:21785835 Defa5 1620 bp upstream
Gm65300 within coordinates of
 SNP C/G C C C C C C C C C C C G C C C C C C C C C C C C C C C C C
rs107848486
MGI SNP Detail		 Chr8:21786023 Defa5 1432 bp upstream
Gm65300 within coordinates of
 SNP A A A
rs218546670
MGI SNP Detail		 Chr8:21786024 Defa5 1431 bp upstream
Gm65300 within coordinates of
 SNP A/T T T A T T T T T T T T A A A A T A T A T A T A T
rs582066850
MGI SNP Detail		 Chr8:21786137 Defa5 1318 bp upstream
Gm65300 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C G C C C C C C C
rs240616190
MGI SNP Detail		 Chr8:21786265 Defa5 1190 bp upstream
Gm65300 within coordinates of
 SNP A/G G G A A A G G G G G G G G A A G A G A A A G A A G G
rs260394831
MGI SNP Detail		 Chr8:21786326 Defa5 1129 bp upstream
Gm65300 within coordinates of
 SNP A/T A T
rs580059328
MGI SNP Detail		 Chr8:21786362 Defa5 1093 bp upstream
Gm65300 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108535612
MGI SNP Detail		 Chr8:21786374 Defa5 1081 bp upstream
Gm65300 within coordinates of
 SNP A/G G A G A
rs584068652
MGI SNP Detail		 Chr8:21786408 Defa5 1047 bp upstream
Gm65300 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586346692
MGI SNP Detail		 Chr8:21786547 Defa5 908 bp upstream
Gm65300 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T
rs580420371
MGI SNP Detail		 Chr8:21786548 Defa5 907 bp upstream
Gm65300 within coordinates of
 SNP G G G G G G G G G G G G G G G G G G
rs215416675
MGI SNP Detail		 Chr8:21786623 Defa5 832 bp upstream
Gm65300 within coordinates of
 SNP C/G G G G C C G G G G C C C C C C C G G C G G G G G G C G C G G C G G C G C
rs30682501
MGI SNP Detail		 Chr8:21788938 Defa5 547 bp downstream
Gm65300 within coordinates of
 SNP A/G G A G
rs30969730
MGI SNP Detail		 Chr8:21788960 Defa5 569 bp downstream
Gm65300 within coordinates of
 SNP C/T T C T
rs216951344
MGI SNP Detail		 Chr8:21789394 Defa5 1003 bp downstream
Gm65300 within coordinates of
 SNP A/G/T A A A A A A A A A T A T T G A T T A T T A G A A A
rs233338230
MGI SNP Detail		 Chr8:21789535 Defa5 1144 bp downstream
Gm65300 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs249460430
MGI SNP Detail		 Chr8:21789571 Defa5 1180 bp downstream
Gm65300 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219823703
MGI SNP Detail		 Chr8:21789629 Defa5 1238 bp downstream
Gm65300 within coordinates of
 SNP C/G C C C C G G C C C C C C G G G G G G G C G C C C C C C C C G C C C G C C C C C G C C C G C G C
rs586241171
MGI SNP Detail		 Chr8:21789650 Defa5 1259 bp downstream
Gm65300 within coordinates of
 SNP C/G G G G G C G G G G G G G G G G G G G G G G G C G G G G G C G C C G
rs235573132
MGI SNP Detail		 Chr8:21789701 Defa5 1310 bp downstream
Gm65300 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs256281881
MGI SNP Detail		 Chr8:21789720 Defa5 1329 bp downstream
Gm65300 within coordinates of
 SNP G/T G G G G G G G G G G G G T G G G
rs583082957
MGI SNP Detail		 Chr8:21789742 Defa5 1351 bp downstream
Gm65300 within coordinates of
 SNP C C C C C C C C C C C C C C C C C
rs248227172
MGI SNP Detail		 Chr8:21789773 Defa5 1382 bp downstream
Gm65300 within coordinates of
 SNP A A A A A A A A A A A A A A A A
rs265458617
MGI SNP Detail		 Chr8:21789925 Defa5 1534 bp downstream
Gm65300 within coordinates of
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs108358460
MGI SNP Detail		 Chr8:21789965 Defa5 1574 bp downstream
Gm65300 within coordinates of
 SNP G G
rs108181153
MGI SNP Detail		 Chr8:21789981 Defa5 1590 bp downstream
Gm65300 within coordinates of
 SNP C C C C C C C C C C C C C C C C C C C C
rs108487503
MGI SNP Detail		 Chr8:21789995 Defa5 1604 bp downstream
Gm65300 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T
rs587220020
MGI SNP Detail		 Chr8:21790288 Defa5 1897 bp downstream
Gm65300 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
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Showing SNP(s) 1 - 36 of 36
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory