rs107596659 SNP Detail

Summary

• ID
  rs107596659
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:72176356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAT TTTATTTTCT CTCTCTCTCC
  Y
  CTCCGTCTCT CCATCTCCCC TTTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144610943	ENSMUSSNP427626	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss324427569	CHEV_13_72165685	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs107596659					SNP	T	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:72176356 () rs orientation: forward

Symbol	Name	Function Class
Rr388680	regulatory region 388680	389 bp downstream
Rr406300	regulatory region 406300	230 bp proximal
Rr482395	regulatory region 482395	35 bp proximal