rs107597034 SNP Detail

Summary

• ID
  rs107597034
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80545214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTCTTT TAAGGGGTTT
  AGGTTTATCC ATTCTGTAAT GAGGGCTTTG TTTCAGTAGC CAATCGGCAC TTGAATACTG
  TAGGTACTTT GCATATTTTT TATGCAAAGA GAATTAAAAA AAAATACTTA GTGTAAGTTC
  TTCAAATGTA TTGAAACGAA AACCTACTTG GTAATGTTGG GCAGCCTAGA GTTCCTAAAA
  R
  CTTACCTAAA ATAATACTTT TTTTTTTTTT TTTTTCGAGA CAGGGTTTCT CTGTGTAGCC
  CTGGCTGTCC TGGACCTCAC TTTGTAGACC AAGCTGGCCT CGAACTCAGA AATCCACCTG
  CCTCTGCCTC CCGAGTGCTG GGATTAAAGG CGTGTGCCAC CACACCCGGC AAAATAATAC
  ATTCTTGACT GAGGTGTCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146071240	ENSMUSSNP1277422	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107597034					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80545214 () rs orientation: forward

Symbol	Name	Function Class
Dhx57	DExH-box helicase 57	519 bp downstream
Rr405469	regulatory region 405469	562 bp downstream
Rr405470	regulatory region 405470	within coordinates
Rr531450	regulatory region 531450	483 bp distal
Rr531451	regulatory region 531451	473 bp distal
Rr531452	regulatory region 531452	305 bp distal