rs107598426 SNP Detail

Summary

• ID
  rs107598426
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32906415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTGGGTG CTTCTAAATC
  AACTAACAAT TAAGACAGTC CCCCAAAGAT GTGCCCACAG ACCACTCTGA TCTGGCAGTA
  CCATGCAACT GAGACTCCCT TCTCAGGTGA GTAGAGGCCC TGTCAAGTTG TCAATTACAA
  CTAACAGGCT TCAATGTTGC CTAGACACCC CTAAGTCCCG GTTGAGACCT TCCCTGATGA
  Y
  GGTCCCTGGG GCTGAAATTA ATACCACCAG AGAACATTCA TCTTCGCAAG CCAAGGTGGC
  TATCTCTGAC GTAGGCTGTA TACCTTCTCC ATTGGCCCTG GGATAGACCC TTGAGACTCA
  GCCATAACCC TGAGAAAGAT GGAGCAGGAC TCAGCACAAA CCCATATAGT GTAGGCTACT
  TGTGCAAATC TTCACATCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362856	CHEV_17_32824386	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107598426					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32906415 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	within coordinates
Rr337381	regulatory region 337381	1100 bp proximal
Rr339615	regulatory region 339615	214 bp distal
Rr341335	regulatory region 341335	186 bp proximal
Tssr143733	transcription start site region 143733	1845 bp downstream
Tssr143734	transcription start site region 143734	1826 bp downstream
Tssr143735	transcription start site region 143735	1798 bp downstream
Tssr143736	transcription start site region 143736	1764 bp downstream
Tssr143737	transcription start site region 143737	1335 bp downstream