rs107598967 SNP Detail

Summary

• ID
  rs107598967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26756574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTC CACATATGCT GTCATCCTTA
  Y
  GGTTGTTCCA GGTCCTGGTC TCAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325342283	CHEV_17_26674545	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107598967					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26756574 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	1236 bp downstream
Gm50275	predicted gene, 50275	within coordinates
Gm64855	predicted gene, 64855	1841 bp downstream
Rr405114	regulatory region 405114	450 bp upstream
Tssr5050	transcription start site region 5050	1764 bp downstream
Tssr143246	transcription start site region 143246	730 bp upstream