rs107605594 SNP Detail

Summary

• ID
  rs107605594
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32362351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGGGGGAAAA ACCTACACTA TATTCCCCAG ATATTCTCTA
  TGAGACAATG GCAAATGCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC
  T
  CTCTCCTCTC TTCTGTCATT TAGAAAAAGC TGTCGAATAT GAAATATTTA TGCTATAAAA
  TAGCTTACTA GGCTTGCTTA CTGGGACCAG CTGGAAAAGA A                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss133099666	ENSMUSSNP4453281	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107605594					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32362351 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628102	regulatory region 628102	187 bp distal
Rr628103	regulatory region 628103	1344 bp proximal