rs107617847 SNP Detail

Summary

• ID
  rs107617847
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171181231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCT GGGGCTAGAG AAATGGCTCA
  S
  TGGTTAAGAG CTAGAGAATC CTGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss119997776	PARCsnp_1.12965	PARC_SEQ	INBRED	f	SNP	G	C
ss119999708	PARCsnp_1.02122	PARC_SEQ	INBRED	f	SNP	G	C
ss320118192	CHEV_1_173283794	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs107617847					SNP	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171181231 () rs orientation: forward

Symbol	Name	Function Class
Gm37154	predicted gene, 37154	463 bp upstream
Pfdn2	prefoldin 2	within coordinates
Rr423296	regulatory region 423296	1878 bp proximal