rs107622652 SNP Detail

Summary

• ID
  rs107622652
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:74000850 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGTTTTTCCA GTTTCCCTGG CTGTATTCTT CCAAGACAGC
  CCTAAGTAGT TGATAACAAC AACAACCATC CCCCCACTTA CATGACTATA CTGAATAGGG
  W
  ACACATAAAG AAATCTTCCT CCTATCCCTC TGCTGTGGGC CTGAGGCATC CATCCAGCTC
  TGACTCGCCC AATGGGACAG AACATCTTTG AGGATGTTCA C                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134208663	ENSMUSSNP860174	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107622652					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:74000850 () rs orientation: forward

Symbol	Name	Function Class
Gm15363	predicted gene 15363	1287 bp upstream
Gm62199	predicted gene, 62199	1421 bp upstream