rs107622930 SNP Detail

Summary

• ID
  rs107622930
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:16805203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCTATTGTAT GGATCACAGA GCCCCCAATA GAGGAGCTAG
  AGAAAGTACC CAAGGAGCTA AAGGGGTCTG CAACCCTATA GGTGGAACAA CAATATGAAC
  W
  AACCAGTACC CCCCGGTGCT CGTGTCTCTA GCTGCATGTG TATCAGAAGA TGGCCTAGTC
  AACCATCAGT GGAAAGAGAG GCCCATTAGT TGTGCAAACT T                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148728654	ENSMUSSNP1483180	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107622930					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:16805203 () rs orientation: forward

Symbol	Name	Function Class
Rr370925	regulatory region 370925	1645 bp upstream