rs107623019 SNP Detail

Summary

• ID
  rs107623019
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12503155 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      T GTTTTACGGG AACACTTTAT TACCACCGTT CCCCAGCTGA
  AGAGTTCTGA ATTCACGCAG TTGAATCCTT CTCAACAGTC TGTTTTACGG GAACCTTTAT
  K
  ACCGTGACCC GCAGTTCTGG TTCCGGAATG AGGAATCTTC CTTGCGCCGG TGATGGTTAA
  CTCCCGTCCC GAGTTTTCTT GTCCCGGGTT TTTTCGTCCC G                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134499021	ENSMUSSNP2227748	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss145199078	ENSMUSSNP6978307	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T
ss145649691	ENSMUSSNP6452622	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107623019					SNP	?	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12503155 () rs orientation: reverse

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	31 bp downstream