rs107634633 SNP Detail

Summary

• ID
  rs107634633
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88899844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTGCTGGGT CTTGGGGTGT GTTCACCTCC AAGCAGGACT
  TTGCCAAGTG GCTGCCCAGG GTGGCAGCAT GAAGTGTCAC AGAGTTCCTG GTGCTCCATA
  C
  ACACACACAC ACATACACAC ACACAAACAC ACACAACACA GGAGTGCAAC CTTAGCGTTA
  TCAGCAGTCT GACAGGAGCC CCCTCATCTT GGCCTCGTA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MSM/Ms
ss132549851	ENSMUSSNP5956863	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	MSM/Ms
rs107634633					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88899844 () rs orientation: forward

Symbol	Name	Function Class
Trim25	tripartite motif-containing 25	within coordinates
Tssr104065	transcription start site region 104065	889 bp downstream
Tssr104066	transcription start site region 104066	1875 bp upstream
Tssr104067	transcription start site region 104067	1951 bp upstream