rs107636873 SNP Detail

Summary

• ID
  rs107636873
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATAACACCA AGCTCAAGAT
  AACCAACATT CCAGCACTGG GGAAGGGATG GTGAGCCCTA GCCCCTAGTT GAGGAGTTAT
  TGGCAGCTGA TGGTGGTGGG AGAGTCAGCT TTCTCTGAGG GTCTGATCAC TGGTAAGCCT
  TTTGTCCCTG ATAGGCACTA CACCTATTTG AATCAGTAAG TTATTTAAAA AAAAAAAAAA
  R
  GGAGGGGTGT GGGTAAGGAG CCAATCTGGA AGGAATTAAG CGGGAGAGTA GGAGGCAAGT
  CTGATCAAAA CACATTTTAT GCATAAAATT CTCAACAACA AATTAATAAA ATATTGTGTA
  TTTAAAAAAA AAAAAAGGTA CATGCTGTGA GTGCAGTCCA GTGCAGAGGA CTTTGGGAGA
  TGGTCTGTGA CCAAGCCTGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362844	CHEV_17_32821958	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs107636873					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903987 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	618 bp upstream
Rr339615	regulatory region 339615	613 bp proximal
Tssr143733	transcription start site region 143733	572 bp upstream
Tssr143734	transcription start site region 143734	597 bp upstream
Tssr143735	transcription start site region 143735	626 bp upstream
Tssr143736	transcription start site region 143736	642 bp upstream
Tssr143737	transcription start site region 143737	1080 bp upstream