rs107638664 SNP Detail

Summary

• ID
  rs107638664
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:150310647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTTAATATCC ACTTATTAGT AAATACATAC CATGCATTTC
  TTTTGGGTCT GGCTTACAGA ACACAGGATA TTTTCTAGTT CCATCCATTG CCCTGGAAAA
  C
  TCATAAGATC CTTGCTTTTA ATAGTCGAAG TGTATCCCAT TGTGTAAATG AAACACATTT
  TCTGTAATCA TTCTTTGGTT GAGGGACATC TGGGTTGTTT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147948888	ENSMUSSNP6455899	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs107638664					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150310647 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12405	CpG island 12405	1347 bp proximal
Gm14127	predicted gene 14127	684 bp downstream
Rr567041	regulatory region 567041	1331 bp proximal