rs107664653 SNP Detail

Summary

• ID
  rs107664653
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:88813751 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGAGAAG AGAAGGGAAA
  GGAAAGGAAG AGAAGGGAAG GGAAGAGAAG AGAAGAGAAG AGAAGAGAAG AGAAGAGAAA
  GGAAAGGAAG AGAAGGGAAG GGAAGAGAAG AGAAGAGAAG AGAAGAGAAG AGAAGAGAAG
  AGAAGAGAAG AGAAAGGAAA GGAAGAGAAG AGAAAAGAAG GGCTGGTGAG ATGGCTCGGC
  A
  GTTAAGAGCA CTGACTGCTC TTCCATAAGG GTCCCGAGTT CAAATCCCAG CAACCACATG
  GTGGCTCGCA ACCACCCGTA ATAAGATCTG ATGCCCTCTT CTAGTGCATC TGAAGACAGC
  TACAGTATAC TTATTTATAA TAATAAATAA ATTGAAAAAA GAAAAGAAAA GGTAGAGAGG
  GTAGAAGGGT AGAGATTTTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss132546750	ENSMUSSNP1839570	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107664653					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:88813751 () rs orientation: forward

Symbol	Name	Function Class
Scpep1	serine carboxypeptidase 1	1095 bp downstream
Scpep1os	serine carboxypeptidase 1, opposite strand	within coordinates
Tssr110047	transcription start site region 110047	1343 bp downstream
Tssr110048	transcription start site region 110048	1358 bp downstream
Tssr110049	transcription start site region 110049	1412 bp downstream
Tssr110050	transcription start site region 110050	1614 bp downstream
Tssr110051	transcription start site region 110051	1655 bp downstream
Tssr110052	transcription start site region 110052	1679 bp downstream
Tssr110053	transcription start site region 110053	1707 bp downstream
Tssr110054	transcription start site region 110054	1774 bp downstream