rs107674975 SNP Detail

Summary

• ID
  rs107674975
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154521884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGCTATCT GATGGTCCTG
  AGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGAT TGTATCCTGA
  AGGTTCCAAT CAATGGGTAA ATCCACCGAT GAGGTCATGC CTCGTAGGCT GTTAGGAGGA
  AGTGGTCCAC TGAGCTATGC CTGGTAAGTA GTTCGTACCC GTTCCTTCCT TGGTTCCTCT
  R
  CTTTCTGACC GCTGTGAACT AAGTAGCTCT GTTGTGCCCT TGTGCTCAGA TGCTCCGCCT
  CATCGCAGGC TCCAAAGCAG TGAGGCTAAC TGACCATGGG ACTGATGCTT TTGAAACTGT
  GAGCCAAAAT AAATCCTTCC TCTTTTAAGT TGATTTTGCC AGGTATTATG TACCACCAAC
  ATACAGCCGG ATTTGAATCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148102356	ENSMUSSNP4917810	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107674975					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154521884 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	968 bp proximal
Prdm16	PR domain containing 16	within coordinates