rs107677117 SNP Detail

Summary

• ID
  rs107677117
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6882415 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C TCAAGCATGG CTTGCCCTCC TTCTTGGCTT CCTGTTGGCC
  CTGGGAAAGG TGAGTTTCAT CCGTCCTCCT TCTGAGGTAG GAGACTGACA CACAGCAGGG
  C
  TGAGTCACTG CACAGCCTGA ATCCAAAAGG ATGACCACAC TAGACCATTC TCTGCCCTCC
  TTCTTGGCTT CCTGTTGGCC CTGGGAAAGG TGAGTTTCAT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145090420	ENSMUSSNP4798618	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107677117					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6882415 () rs orientation: reverse

Symbol	Name	Function Class
Rr521399	regulatory region 521399	844 bp proximal
Tmem181c-ps	transmembrane protein 181C, pseudogene	within coordinates