rs107682233 SNP Detail

Summary

• ID
  rs107682233
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:58473308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TACCTTTTTC CCTGCTTCTT CTGTATGTAC TCTGCCTCTT
  AGTAGCACTG CCATTCCCAT TTTCTCGATC AGATACTTGT ATCCTGCATT TCTGCTGTCT
  M
  TTGCTCTCAC ACTCACCCCT ATCCTGGCAA TGGTCCTCAT TTACTTTCCT GGTTTCCATA
  GTTTCTAAAG GTTACTTAAT TACCTGATGA TGTGGAGCTA G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133246315	ENSMUSSNP782847	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107682233					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:58473308 () rs orientation: forward

Symbol	Name	Function Class
Gm35077	predicted gene, 35077	1633 bp downstream
Vmn1r-ps22	vomeronasal 1 receptor, pseudogene 22	1076 bp upstream