rs107695322 SNP Detail

Summary

• ID
  rs107695322
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:36726514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCCACTTC ATCCTTCAAG
  CCTGGTGCCT GGACACCCTG AGGGAGGAAA CAGAGGACAG AGAAGCACTT CTGGCACCCA
  ACGCGGCCCA CAGCTGGAGG AAGCTAACAT ACACCTGGGA GGATGCTGGT ACTTGATGGG
  CTGGGCTATG TCACAAGAGG GTGTGGTACA GACCTTTGAT GGGCTGGGCT ATGTCACAAG
  K
  GAGTGTGGTA CAAATGCTTG CCATATAATG CTTTGCTATT GCTCTCCTGG TTGGGTCACC
  AATCTTTAGA CACTTAAATT GTCTAAATGT AAAGAGAATT AATGTCACTA CAGGCTGCTA
  AAGAGCAGAA GTTACTGTTG GCATGACCTG GCAATAGCCA GGTATGCCTG GCTCACTCTA
  AAAGGGTCTG CATGTCTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147608140	ENSMUSSNP5904288	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs107695322					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:36726514 () rs orientation: forward

Symbol	Name	Function Class
A830021M18Rik	RIKEN cDNA A830021M18 gene	within coordinates
Cpgi7034	CpG island 7034	1066 bp proximal
Gm41297	predicted gene, 41297	within coordinates
Gm49263	predicted gene, 49263	1034 bp downstream
Tssr131078	transcription start site region 131078	993 bp downstream
Tssr131079	transcription start site region 131079	50 bp upstream
Tssr131080	transcription start site region 131080	91 bp upstream
Tssr131081	transcription start site region 131081	122 bp upstream
Tssr131082	transcription start site region 131082	397 bp upstream
Tssr131083	transcription start site region 131083	590 bp upstream
Tssr131084	transcription start site region 131084	636 bp upstream