rs107697167 SNP Detail

Summary

• ID
  rs107697167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89510408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA AATTAATAAA ATTTTTAAAA
  Y
  GCTAATAGAA GTAAAATATA TAAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147258272	ENSMUSSNP1999993	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss323382923	CHEV_10_89137291	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs107697167					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89510408 () rs orientation: forward

Symbol	Name	Function Class
Rr220830	regulatory region 220830	1993 bp proximal
Scyl2	SCY1-like 2 (S. cerevisiae)	within coordinates
Tssr98887	transcription start site region 98887	351 bp upstream