rs107709252 SNP Detail

Summary

• ID
  rs107709252
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:133271171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAC ATTGTGTCAG TTTAGGAACA
  S
  GCAGACAAGG TTCACATTTG CAGAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147498139	ENSMUSSNP6892269	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321341376	CHEV_4_133099775	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs107709252					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:133271171 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15007	CpG island 15007	1541 bp proximal
Nudc	nudC nuclear distribution protein	within coordinates
Tssr43767	transcription start site region 43767	1758 bp downstream