rs107714251 SNP Detail

Summary

• ID
  rs107714251
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51343100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGCTGTCTCA TTCCAGTCCT CTAACACCCC TTGAGACCAA
  TTCTGCCACT GTATTTAGAA GCTTTGAGTT AAAGGATTTG ACGACCACAA AAAACCAAAA
  A
  CAAAACCAAA AACAAAAACC CAGTGGAAGA TCTCAGACAA AAATCCAACT GGACGGGCTA
  CTCACAAAAG GTGTTACCCA CTTCGTTATA TATACTTTCT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139474655	ENSMUSSNP5564527	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs107714251					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51343100 () rs orientation: forward

Symbol	Name	Function Class
Rnase4	ribonuclease, RNase A family 4	within coordinates
Rr288976	regulatory region 288976	1700 bp distal
Rr288977	regulatory region 288977	500 bp distal
Rr295428	regulatory region 295428	526 bp proximal
Rr299307	regulatory region 299307	1909 bp distal
Tssr125402	transcription start site region 125402	754 bp downstream
Tssr125403	transcription start site region 125403	602 bp downstream
Tssr125404	transcription start site region 125404	462 bp downstream
Tssr125405	transcription start site region 125405	235 bp downstream
Tssr125406	transcription start site region 125406	158 bp downstream
Tssr128409	transcription start site region 128409	236 bp upstream
Tssr128410	transcription start site region 128410	216 bp upstream