rs107714776 SNP Detail

Summary

• ID
  rs107714776
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170901553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCTGACTGGT TCATCCATCT ATCCATGCAT CCATGCATCC
  ATGCATCCAT GCATCCATGC ATCCATGCAT CCATCCATCC ATCCATCCAT CCATCCATCC
  A
  TCCATCCCTC CAACCATGTA TCCATGTATC CATGCATCCT TCCATGCACG CATCCTTCCA
  TCCACCCACC CACCAACCCA ACCAACCGTC CGTGAATCCA T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146152467	ENSMUSSNP1544313	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs107714776					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170901553 () rs orientation: forward

Symbol	Name	Function Class
Gm56232	predicted gene, 56232	1697 bp upstream
n-TDgtc7	nuclear encoded tRNA aspartic acid 7 (anticodon GTC)	920 bp upstream
n-TGgcc13	nuclear encoded tRNA glycine 13 (anticodon GCC)	318 bp upstream
n-TGtcc5	nuclear encoded tRNA glycine 5 (anticodon TCC)	1579 bp upstream
n-TLcag7	nuclear encoded tRNA leucine 7 (anticodon CAG)	283 bp downstream