rs107715802 SNP Detail

Summary

• ID
  rs107715802
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93453287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA TATGGTAGCA CCAAGAGATA
  M
  CCTGAAGACT CTCCCACACT CCAGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148847003	ENSMUSSNP1010012	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321615087	CHEV_5_93734454	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs107715802					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93453287 () rs orientation: forward

Symbol	Name	Function Class
Gm72287	predicted gene, 72287	within coordinates
Tssr51943	transcription start site region 51943	998 bp downstream
Tssr51944	transcription start site region 51944	1010 bp downstream
Tssr51945	transcription start site region 51945	1022 bp downstream