rs107725326 SNP Detail

Summary

• ID
  rs107725326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:5465144 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATGGATCT GGAGGAAGAA
  CCGGGGCTAA CTTCTACAGA TAGTTATTTA GTTTATTTAC TTTTGGTAAG AGACAGAAAA
  AGCATATTTT TTCACATTAT ACATTTTTGT ATTCAAAATG TAAGTGTGGT ATGTCCCCCA
  ATCTCTCATG CCAACTGTGA TGGCTGGTTT TACTTGCCAC TTTGACAGAT TCTGGAATTA
  Y
  CAGAGGATGG GCCTGTAAGT ATGCTATGAA GGATTATCTT GATTATCGTA ATTGCTATGG
  GAAGACCCAT CTTAACTCTG GGCAGAACCA CTCCCCTGGC AGGGGTTCTT GGATTCTATG
  CAAGTGATGA GACTGTGAAG ATCACTAGCA TGCATTTGTC TGTTTCTTAG CTGGGGACAC
  AATGTGACCA GGTAATTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss148484740	ENSMUSSNP5063698	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107725326					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:5465144 () rs orientation: forward

Symbol	Name	Function Class
Rr370762	regulatory region 370762	1243 bp upstream