rs107733846 SNP Detail

Summary

• ID
  rs107733846
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154521894 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGTCCTG AGTGTGTGTG
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGAT TGTATCCTGA AGGTTCCAAT
  CAATGGGTAA ATCCACCGAT GAGGTCATGC CTCGTAGGCT GTTAGGAGGA AGTGGTCCAC
  TGAGCTATGC CTGGTAAGTA GTTCGTACCC GTTCCTTCCT TGGTTCCTCT ACTTTCTGAC
  M
  GCTGTGAACT AAGTAGCTCT GTTGTGCCCT TGTGCTCAGA TGCTCCGCCT CATCGCAGGC
  TCCAAAGCAG TGAGGCTAAC TGACCATGGG ACTGATGCTT TTGAAACTGT GAGCCAAAAT
  AAATCCTTCC TCTTTTAAGT TGATTTTGCC AGGTATTATG TACCACCAAC ATACAGCCGG
  ATTTGAATCT ACTATTTTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148102359	ENSMUSSNP4518834	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs107733846					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154521894 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	958 bp proximal
Prdm16	PR domain containing 16	within coordinates