rs107733879 SNP Detail

Summary

• ID
  rs107733879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:150310655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CCACTTATTA GTAAATACAT ACCATGCATT TCTTTTGGGT
  CTGGCTTACA GAACACAGGA TATTTTCTAG TTCCATCCAT TGCCCTGGAA AACTCATAAG
  R
  TCCTTGCTTT TAATAGTCGA AGTGTATCCC ATTGTGTAAA TGAAACACAT TTTCTGTAAT
  CATTCTTTGG TTGAGGGACA TCTGGGTTGT TTCTAGCTTC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147948892	ENSMUSSNP3142508	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs107733879					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150310655 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12405	CpG island 12405	1339 bp proximal
Gm14127	predicted gene 14127	676 bp downstream
Rr567041	regulatory region 567041	1323 bp proximal