rs107735867 SNP Detail

Summary

• ID
  rs107735867
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:72887298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTGGCT TCACGTAGTT
  TTTTATTAGG ACTTTGTGGT CTTGTGTTTC TGGATGGCTG GGGTGGGGCT AAGACGCCTT
  GACTTTTAGA ACATGCTGGT ACTTGTCCCC CTGGTCTCAG ACTGACCACA CAACCCTTCC
  CTGGAGAGAC ATTTGTCAGC TAGGCTGAGA CTGGGAACTA GGGGCTGCTT TGAGTGTTTG
  Y
  GTGCACACAG TTGGCTCTAT GAGAGTGATT CTCAATGGCA GGTGGCTGCC TGCCTTGCAG
  TCCCTTGCCA GCTGTGCCCC AGCCCAGGGA TCTTGTGGTA GTAGTTTTTT AAACCTCAAC
  TAGTCTGCCA TGATCGGACC ATAAAGGAAG GACTTAAACT TGGGGTTAGT GGAGAGTGAG
  CACGATATTT TCTGATGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144663599	ENSMUSSNP4426827	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs107735867					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:72887298 () rs orientation: forward

Symbol	Name	Function Class
Igfbp2	insulin-like growth factor binding protein 2	within coordinates
Tssr7321	transcription start site region 7321	940 bp upstream
Tssr7322	transcription start site region 7322	969 bp upstream
Tssr7323	transcription start site region 7323	1012 bp upstream
Tssr7324	transcription start site region 7324	1061 bp upstream
Tssr7325	transcription start site region 7325	1076 bp upstream
Tssr7326	transcription start site region 7326	1106 bp upstream
Tssr7327	transcription start site region 7327	1135 bp upstream
Tssr7328	transcription start site region 7328	1438 bp upstream
Tssr7329	transcription start site region 7329	1473 bp upstream
Tssr7330	transcription start site region 7330	1487 bp upstream
Tssr12178	transcription start site region 12178	976 bp downstream
Tssr12179	transcription start site region 12179	1019 bp downstream
Tssr12180	transcription start site region 12180	1083 bp downstream
Tssr12181	transcription start site region 12181	1104 bp downstream
Tssr12182	transcription start site region 12182	1147 bp downstream
Tssr12183	transcription start site region 12183	1168 bp downstream