rs107736275 SNP Detail

Summary

• ID
  rs107736275
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:5205760 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A TTTGAATTTG ATCCAGACCC CAAAGTTGGA AGGAGAGAAC
  AGACTGAAAA AATTGTCCTC TGGCTACACA CACACACACA CACACACACA CACACACACA
  S
  ACACACACAC ACACACAGAC ACACACACAG ACACATACAC ACACACACAC ATACACACAC
  ACAGACACAT ACACACACTC ACACACACAC ACACATACAC A                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146738480	ENSMUSSNP4398299	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs107736275					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:5205760 () rs orientation: reverse

Symbol	Name	Function Class
Rr227855	regulatory region 227855	1761 bp distal
Rr230259	regulatory region 230259	996 bp proximal
Syne1	spectrin repeat containing, nuclear envelope 1	within coordinates